Miyakogusa Predicted Gene

Lj1g3v3356570.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3356570.2 tr|Q75UP8|Q75UP8_IPOBA Kinesin heavy chain-like
protein (Fragment) OS=Ipomoea batatas GN=SRF5 PE=2
S,69.74,7e-18,coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; DUF3490,Protein of unknown functi,CUFF.30540.2
         (1635 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74214 similar to UniRef100_A7P7Y5 Cluster: Chromosome...    96   8e-19

>gnl|LJGI|TC74214 similar to UniRef100_A7P7Y5 Cluster: Chromosome chr3 scaffold_8,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr3 scaffold_8, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (5%)
          Length = 770

 Score = 95.6 bits (48), Expect = 8e-19
 Identities = 162/200 (81%)
 Strand = Plus / Plus

                                                                        
Query: 1378 gaggaagagaggaaaaatctgttcaagaagtggggcattgcattggattcaaagcgcagg 1437
            ||||||||||| || |  || |||||| |||||| |||| ||||| ||||||||||||||
Sbjct: 6    gaggaagagagaaagaggctcttcaaggagtgggacattccattgaattcaaagcgcagg 65

                                                                        
Query: 1438 aggatgcaactggtgaaccggttatggagcaacactgatatcgaccacatcacggagagt 1497
            |||||||| || | ||| || ||||||||||||||||| ||  ||||||| | | |||||
Sbjct: 66   aggatgcagctagcgaatcgtttatggagcaacactgacatgaaccacataatgcagagt 125

                                                                        
Query: 1498 gctgccattgtcgcaaagttagtcaggtttaaagagcaaggtaaggccttgaaggagaca 1557
            ||  |  | || |||||||| || ||||||  |||||| || |||||  |||| ||||  
Sbjct: 126  gccacagtagttgcaaagttggttaggttttcagagcagggcaaggcactgaaagagatg 185

                                
Query: 1558 tttggacttagcttcacacc 1577
            ||||| ||||||||||||||
Sbjct: 186  tttgggcttagcttcacacc 205