Miyakogusa Predicted Gene
- Lj1g3v3354490.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3354490.1 gi|34495198|emb|AJ575747.1|.path2.1
(1525 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59355 UniRef100_Q70KF5 Cluster: Arginine decarboxylas... 3023 0.0
gnl|LJGI|TC72418 similar to UniRef100_Q39827 Cluster: Arginine d... 896 0.0
gnl|LJGI|TC68262 similar to UniRef100_Q2PEQ1 Cluster: Arginine d... 139 6e-32
gnl|LJGI|TC79948 similar to UniRef100_Q43075 Cluster: Arginine d... 64 3e-09
gnl|LJGI|BW598257 weakly similar to UniRef100_A2Q3E0 Cluster: DN... 60 4e-08
>gnl|LJGI|TC59355 UniRef100_Q70KF5 Cluster: Arginine decarboxylase; n=1; Lotus
japonicus|Rep: Arginine decarboxylase - Lotus japonicus,
partial (98%)
Length = 1950
Score = 3023 bits (1525), Expect = 0.0
Identities = 1525/1525 (100%)
Strand = Plus / Plus
Query: 1 atggctatgagttgtctatgcaaaggcaacgcagaagcgcttctcatctgtaatggattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 atggctatgagttgtctatgcaaaggcaacgcagaagcgcttctcatctgtaatggattc 259
Query: 61 aaggacgccgagtacatttccctcgccctggctgcgaggaagctggctctgaactccgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aaggacgccgagtacatttccctcgccctggctgcgaggaagctggctctgaactccgtg 319
Query: 121 attgtgctggagcaagaggaggaggttgacctgatcattgatctgagcaacaagatgcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 attgtgctggagcaagaggaggaggttgacctgatcattgatctgagcaacaagatgcac 379
Query: 181 attcgccctgtgattggaatgcgggcgaagctgcggaccaagcattcgggccatttcggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 attcgccctgtgattggaatgcgggcgaagctgcggaccaagcattcgggccatttcggt 439
Query: 241 gggacttccggtgagagggggaaattcgggctcacaactgctcagattctgagggttgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gggacttccggtgagagggggaaattcgggctcacaactgctcagattctgagggttgtg 499
Query: 301 aagaagcttgagcacgctggcatgctggattgcctgcaactcctgcattttcacataggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aagaagcttgagcacgctggcatgctggattgcctgcaactcctgcattttcacataggc 559
Query: 361 tctcagattccttccaccgcgttgctcgctgatggtgtgggagaagctgcgcagatctat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tctcagattccttccaccgcgttgctcgctgatggtgtgggagaagctgcgcagatctat 619
Query: 421 tgtgaactggttcgtctcggggctcaaatgcgagtcattgatattggaggtggcctcggc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tgtgaactggttcgtctcggggctcaaatgcgagtcattgatattggaggtggcctcggc 679
Query: 481 attgattacgacggtacaaaatctagtgactctgatatctctgttgggtatggtcttcaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 attgattacgacggtacaaaatctagtgactctgatatctctgttgggtatggtcttcaa 739
Query: 541 gagtatgccactgcggtggttcgcgccgttcagggtgtctgcgaccggaggtccatcaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gagtatgccactgcggtggttcgcgccgttcagggtgtctgcgaccggaggtccatcaag 799
Query: 601 cacccggttatctgcagtgagagcggcagggctattgtttctcaccattctgtgttggtg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 cacccggttatctgcagtgagagcggcagggctattgtttctcaccattctgtgttggtg 859
Query: 661 ttcgaagctgttggtgctagcagctatggagcgccccctgcattctcatctctggctctg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 ttcgaagctgttggtgctagcagctatggagcgccccctgcattctcatctctggctctg 919
Query: 721 cagtacttggtggaggggctctcggaggaagctcgtgctgattaccgcaacctctctgat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920 cagtacttggtggaggggctctcggaggaagctcgtgctgattaccgcaacctctctgat 979
Query: 781 gcggcgatcaggggagaacatgagacctgcttgctgtacactgaggagatgaaacggcgc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 980 gcggcgatcaggggagaacatgagacctgcttgctgtacactgaggagatgaaacggcgc 1039
Query: 841 tgcgtggaggagtttaagcaagggcttttgggaatggaagagcttgccggcgtggagggg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1040 tgcgtggaggagtttaagcaagggcttttgggaatggaagagcttgccggcgtggagggg 1099
Query: 901 ttgtgtgatttggtaaggaagacggtgggggaggctgatccagttcggaggtaccacgtg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1100 ttgtgtgatttggtaaggaagacggtgggggaggctgatccagttcggaggtaccacgtg 1159
Query: 961 aacctctccattttcacctctatccctgacgtgtggagcattgatcaggtgtttcccatt 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1160 aacctctccattttcacctctatccctgacgtgtggagcattgatcaggtgtttcccatt 1219
Query: 1021 atccccattcaccgcctcgatgagaagcccactgtgaaaggcatcctctctgatctgacc 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1220 atccccattcaccgcctcgatgagaagcccactgtgaaaggcatcctctctgatctgacc 1279
Query: 1081 tgtgacagtgatgggaagattgacaagttcatcaacggagagtcaagcttggcgatgcac 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1280 tgtgacagtgatgggaagattgacaagttcatcaacggagagtcaagcttggcgatgcac 1339
Query: 1141 gagttggaaggtgggaggaagtactatctgggaatgttcttgggcggtgcttatgaggag 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1340 gagttggaaggtgggaggaagtactatctgggaatgttcttgggcggtgcttatgaggag 1399
Query: 1201 gcgcttggtggttaccacaacttgtttggaggtcccagcgtggttcgggtgttgcagagc 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1400 gcgcttggtggttaccacaacttgtttggaggtcccagcgtggttcgggtgttgcagagc 1459
Query: 1261 gaaggtccacacagcttcgcggtgacgcgtgcaatgccgggtccttccaatggagacgta 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1460 gaaggtccacacagcttcgcggtgacgcgtgcaatgccgggtccttccaatggagacgta 1519
Query: 1321 cttcgagtgatgcagcaccagcctgagctcatgtttgagactctcaagcaccgcgcagag 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1520 cttcgagtgatgcagcaccagcctgagctcatgtttgagactctcaagcaccgcgcagag 1579
Query: 1381 gagtctgtgcatgatgatgagctcactgctgcggctctcgccacagccctggctcgctcg 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1580 gagtctgtgcatgatgatgagctcactgctgcggctctcgccacagccctggctcgctcg 1639
Query: 1441 ttccacaacatgccttatctggtaactgctgctgaccatgctggagaggatgagcatgat 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1640 ttccacaacatgccttatctggtaactgctgctgaccatgctggagaggatgagcatgat 1699
Query: 1501 caatggtcttattgcattgcttgag 1525
|||||||||||||||||||||||||
Sbjct: 1700 caatggtcttattgcattgcttgag 1724
>gnl|LJGI|TC72418 similar to UniRef100_Q39827 Cluster: Arginine decarboxylase; n=1;
Glycine max|Rep: Arginine decarboxylase - Glycine max
(Soybean), partial (50%)
Length = 1113
Score = 896 bits (452), Expect = 0.0
Identities = 452/452 (100%)
Strand = Plus / Plus
Query: 1 atggctatgagttgtctatgcaaaggcaacgcagaagcgcttctcatctgtaatggattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 atggctatgagttgtctatgcaaaggcaacgcagaagcgcttctcatctgtaatggattc 617
Query: 61 aaggacgccgagtacatttccctcgccctggctgcgaggaagctggctctgaactccgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 aaggacgccgagtacatttccctcgccctggctgcgaggaagctggctctgaactccgtg 677
Query: 121 attgtgctggagcaagaggaggaggttgacctgatcattgatctgagcaacaagatgcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 attgtgctggagcaagaggaggaggttgacctgatcattgatctgagcaacaagatgcac 737
Query: 181 attcgccctgtgattggaatgcgggcgaagctgcggaccaagcattcgggccatttcggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 attcgccctgtgattggaatgcgggcgaagctgcggaccaagcattcgggccatttcggt 797
Query: 241 gggacttccggtgagagggggaaattcgggctcacaactgctcagattctgagggttgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 gggacttccggtgagagggggaaattcgggctcacaactgctcagattctgagggttgtg 857
Query: 301 aagaagcttgagcacgctggcatgctggattgcctgcaactcctgcattttcacataggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 aagaagcttgagcacgctggcatgctggattgcctgcaactcctgcattttcacataggc 917
Query: 361 tctcagattccttccaccgcgttgctcgctgatggtgtgggagaagctgcgcagatctat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 918 tctcagattccttccaccgcgttgctcgctgatggtgtgggagaagctgcgcagatctat 977
Query: 421 tgtgaactggttcgtctcggggctcaaatgcg 452
||||||||||||||||||||||||||||||||
Sbjct: 978 tgtgaactggttcgtctcggggctcaaatgcg 1009
Score = 210 bits (106), Expect = 2e-53
Identities = 106/106 (100%)
Strand = Plus / Plus
Query: 1298 cgggtccttccaatggagacgtacttcgagtgatgcagcaccagcctgagctcatgtttg 1357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1008 cgggtccttccaatggagacgtacttcgagtgatgcagcaccagcctgagctcatgtttg 1067
Query: 1358 agactctcaagcaccgcgcagaggagtctgtgcatgatgatgagct 1403
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1068 agactctcaagcaccgcgcagaggagtctgtgcatgatgatgagct 1113
>gnl|LJGI|TC68262 similar to UniRef100_Q2PEQ1 Cluster: Arginine decarboxylase; n=1;
Trifolium pratense|Rep: Arginine decarboxylase -
Trifolium pratense (Red clover), partial (47%)
Length = 1479
Score = 139 bits (70), Expect = 6e-32
Identities = 291/364 (79%), Gaps = 3/364 (0%)
Strand = Plus / Plus
Query: 1012 tttcccattatccccattcaccgcctcgatgagaagcccactgtgaaaggcatcctctct 1071
|||||||| |||| ||||| || |||||||||||||| || | ||| || || || ||
Sbjct: 564 tttcccatagtcccaattcatcgtctcgatgagaagcctaccgcgaaggggattctatca 623
Query: 1072 gatctgacctgtgacagtgatgggaagattgacaagttcatcaacggagagtcaagcttg 1131
||| ||||||| |||||||| ||||||||||||||||||||| || ||||| ||||||
Sbjct: 624 gatttgacctgggacagtgacgggaagattgacaagttcatcggtggtgagtccagcttg 683
Query: 1132 gcgatgcacgagttggaaggtgggaggaagtactatctgggaatgttcttgggcggtgct 1191
|| | || || ||||||| ||| | ||||| |||||||||||||||| || |||
Sbjct: 684 ccgctccatgaattggaagacgggc---actactacttgggaatgttcttgggtggggct 740
Query: 1192 tatgaggaggcgcttggtggttaccacaacttgtttggaggtcccagcgtggttcgggtg 1251
|||||||||||||| |||||| |||||| ||||||| || || |||||||| |||||
Sbjct: 741 tatgaggaggcgctcggtggtgttcacaacctgtttggtggcccaagcgtggtgagggtg 800
Query: 1252 ttgcagagcgaaggtccacacagcttcgcggtgacgcgtgcaatgccgggtccttccaat 1311
|||||||||| || || ||| | ||||||||||||||||| || | || || || |
Sbjct: 801 gtgcagagcgacgggcctcacggtttcgcggtgacgcgtgcggtggctgggccgtcttgt 860
Query: 1312 ggagacgtacttcgagtgatgcagcaccagcctgagctcatgtttgagactctcaagcac 1371
|| || || || |||| |||||||| ||||| ||||||||||| ||||| ||||||||
Sbjct: 861 ggggatgtcctccgagcaatgcagcatcagccagagctcatgttcgagaccctcaagcat 920
Query: 1372 cgcg 1375
||||
Sbjct: 921 cgcg 924
Score = 63.9 bits (32), Expect = 3e-09
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 613 tgcagtgagagcggcagggctattgtttctcaccattctgtgttggtgttcgaagctgtt 672
||||||||||| ||||| || ||||| ||||| ||||| |||||| | ||||| ||||||
Sbjct: 162 tgcagtgagagtggcagagccattgtgtctcatcattcagtgttgattttcgaggctgtt 221
Query: 673 ggtgctag 680
||||||||
Sbjct: 222 ggtgctag 229
Score = 60.0 bits (30), Expect = 4e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 511 tctgatatctctgttgggtatggtcttcaagagtatgc 548
||||||||||||||||||||| ||||| ||||||||||
Sbjct: 60 tctgatatctctgttgggtatagtcttgaagagtatgc 97
>gnl|LJGI|TC79948 similar to UniRef100_Q43075 Cluster: Arginine decarboxylase; n=1;
Pisum sativum|Rep: Arginine decarboxylase - Pisum
sativum (Garden pea), partial (19%)
Length = 466
Score = 63.9 bits (32), Expect = 3e-09
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 613 tgcagtgagagcggcagggctattgtttctcaccattctgtgttggtgttcgaagctgtt 672
||||||||||| ||||| || ||||| ||||| ||||| |||||| | ||||| ||||||
Sbjct: 191 tgcagtgagagtggcagagccattgtgtctcatcattcagtgttgattttcgaggctgtt 250
Query: 673 ggtgctag 680
||||||||
Sbjct: 251 ggtgctag 258
Score = 60.0 bits (30), Expect = 4e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 511 tctgatatctctgttgggtatggtcttcaagagtatgc 548
||||||||||||||||||||| ||||| ||||||||||
Sbjct: 89 tctgatatctctgttgggtatagtcttgaagagtatgc 126
>gnl|LJGI|BW598257 weakly similar to UniRef100_A2Q3E0 Cluster: DNA-directed RNA
polymerase, 14 to 18 kDa subunit; n=1; Medicago
truncatula|Rep: DNA-directed RNA polymerase, 14 to 18 kDa
subunit - Medicago truncatula (Barrel medic), partial
(46%)
Length = 468
Score = 60.0 bits (30), Expect = 4e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 1467 tgctgctgaccatgctggagaggatgagcatgatcaatggtcttattgcattgcttga 1524
|||||||||||||||||| |||||||| |||||| |||| || |||||||||||||
Sbjct: 149 tgctgctgaccatgctggtgaggatgaacatgatggatggcctctttgcattgcttga 206