Miyakogusa Predicted Gene
- Lj1g3v3354090.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3354090.1 Non Chatacterized Hit- tr|I3MXC9|I3MXC9_SPETR
Uncharacterized protein (Fragment) OS=Spermophilus
tri,34.15,1.1,seg,NULL,CUFF.30517.1
(426 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80858 similar to UniRef100_Q2W739 Cluster: Ubiquinone... 567 e-161
gnl|LJGI|TC60481 375 e-103
>gnl|LJGI|TC80858 similar to UniRef100_Q2W739 Cluster: Ubiquinone biosynthesis protein
COQ7; n=1; Magnetospirillum magneticum AMB-1|Rep:
Ubiquinone biosynthesis protein COQ7 - Magnetospirillum
magneticum (strain AMB-1 / ATCC 700264), partial (8%)
Length = 1299
Score = 567 bits (286), Expect = e-161
Identities = 357/377 (94%), Gaps = 4/377 (1%)
Strand = Plus / Minus
Query: 52 tcagccatcgacataaccacgcaccttgcatcaacgccaaccaatgtctgtgcgctatca 111
||||||||||||||||||||| || ||||||||||||||||||||| | | ||||||||
Sbjct: 1299 tcagccatcgacataaccacgtac-ttgcatcaacgccaaccaatgcccgcacgctatca 1241
Query: 112 ccacacaccttgcatccatgtcagccaatgcccatgtgctataaccacacatcttgcatt 171
|||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 1240 ccacacac-ttgcatccatgtcagccaatgcccatgtgctatcagcacacatcttgcatt 1182
Query: 172 aaagccaaccaatgcatgtgtgtcacctggacagttacatgtccaccttgtgtagtcctg 231
|| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1181 aataccaaccaatgcttgtgtgtcacctggacagttacatgcccaccttgtgtagtcctg 1122
Query: 232 attgcatcgaccatccatgacttgcaacaagtcaaaatacaat--ctctatcacagcact 289
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1121 attgcatcgaccatccatgacttgcaacaagtcaaaatacaatctctctatcacagcact 1062
Query: 290 gccacataccaactgaaaactgtgcaccaggtaggtttctgagagaaccttccaaaacag 349
|||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 1061 gccacataccaactgaaaaccgtgcaccgggtaggtttctgagagaaccttccaaaacag 1002
Query: 350 cactttcacagtatcattgtggctccaagcggaagctatcctcaaagccgtcaccatggt 409
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1001 cactttcacagtatcattgtggttccaagcggaagctatcctcaaagccgtcaccatggt 942
Query: 410 tgaaccatcggctctga 426
||||||| ||||||||
Sbjct: 941 cgaaccatgggctctga 925
>gnl|LJGI|TC60481
Length = 836
Score = 375 bits (189), Expect = e-103
Identities = 214/220 (97%), Gaps = 3/220 (1%)
Strand = Plus / Plus
Query: 210 atgtccaccttgtgtagtcctgattgcatcgaccatccatgacttgcaacaagtcaaaa- 268
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atgtcccccttgtgtagtcctgattgcatcgaccatccatgacttgcaacaagtcaaaaa 439
Query: 269 tacaatctc--tatcacagcactgccacataccaactgaaaactgtgcaccaggtaggtt 326
||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 440 tacaatctctctatcacagcactgccacataccaactgaaaaccgtgcaccaggtaggtt 499
Query: 327 tctgagagaaccttccaaaacagcactttcacagtatcattgtggctccaagcggaagct 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tctgagagaaccttccaaaacagcactttcacagtatcattgtggctccaagcggaagct 559
Query: 387 atcctcaaagccgtcaccatggttgaaccatcggctctga 426
||||||||||||||||||||||| ||||||||||||||||
Sbjct: 560 atcctcaaagccgtcaccatggtcgaaccatcggctctga 599
Score = 258 bits (130), Expect = 2e-68
Identities = 166/178 (93%)
Strand = Plus / Plus
Query: 9 aatttatggtgcaacttccatgttggctttctctggaagttcatcagccatcgacataac 68
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 20 aatttatggtgcaacttccatgttggctttctccagaagttcatcagccatcgacataac 79
Query: 69 cacgcaccttgcatcaacgccaaccaatgtctgtgcgctatcaccacacaccttgcatcc 128
|||| |||||||||||||||||||||||| | | |||||||||||||||||||||||||
Sbjct: 80 cacgtaccttgcatcaacgccaaccaatgcccgcacgctatcaccacacaccttgcatcc 139
Query: 129 atgtcagccaatgcccatgtgctataaccacacatcttgcattaaagccaaccaatgc 186
||||| | |||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 140 atgtccgttaatgcccatgtgctataaccacacatcttgcattaatgtcaaccaatgc 197