Miyakogusa Predicted Gene

Lj1g3v3330680.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3330680.1 Non Chatacterized Hit- tr|C3YPG3|C3YPG3_BRAFL
Putative uncharacterized protein OS=Branchiostoma flor,30.43,1e-18,GB
DEF: HYPOTHETICAL PROTEIN,NULL; FAMILY NOT NAMED,NULL; seg,NULL;
zf-primase,Zinc finger, Mcm10/Dn,CUFF.30484.1
         (1260 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW627711 similar to UniRef100_A7P8B3 Cluster: Chromosom...   737   0.0  

>gnl|LJGI|BW627711 similar to UniRef100_A7P8B3 Cluster: Chromosome chr3 scaffold_8,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_8, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (16%)
          Length = 466

 Score =  737 bits (372), Expect = 0.0
 Identities = 378/380 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcaaaccacgaagacgacttggatctcctcctttctcttgatgatcaggatcaggag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87  atgtcaaaccacgaagacgacttggatctcctcctttctcttgatgatcaggatcaggag 146

                                                                       
Query: 61  agggttctcgaaacccctcctggttctccctccccaggttacttgaccgattccgattcc 120
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 agggttctcgaaacccctcttggttctccctccccaggttacttgaccgattccgattcc 206

                                                                       
Query: 121 gatggcgcccccaaccaaagggacaagaaccccgacatgtccgttttcagaaatgctgtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gatggcgcccccaaccaaagggacaagaaccccgacatgtccgttttcagaaatgctgtt 266

                                                                       
Query: 181 caggattgccttctctctcattcccctgagccaaaacctaaacctaaatccaaacttcct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 caggattgccttctctctcattcccctgagccaaaacctaaacctaaatccaaacttcct 326

                                                                       
Query: 241 gctactcatgctaaagattccgatgtcgagaaattttcaggtcttcgaataagggaccaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gctactcatgctaaagattccgatgtcgagaaattttcaggtcttcgaataagggaccaa 386

                                                                       
Query: 301 ttgttaacccctgctgagctcagggactccttttcagacattcgtttcgttcggttacca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ttgttaacccctgctgagctcagggactccttttcagacattcgtttcgttcggttacca 446

                               
Query: 361 gttatcaagaatttgtttat 380
           ||||||||||||| ||||||
Sbjct: 447 gttatcaagaattcgtttat 466