Miyakogusa Predicted Gene
- Lj1g3v3330550.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3330550.1 tr|G0LBN3|G0LBN3_ZOBGA High-affinity
nickel-transport protein OS=Zobellia galactanivorans (strain
DS,30.91,1e-18,NicO,Nickel/cobalt transporter, high-affinity;
seg,NULL,CUFF.30483.1
(1155 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59175 similar to UniRef100_A7P8C2 Cluster: Chromosome... 2290 0.0
gnl|LJGI|TC66549 similar to UniRef100_A7P8C2 Cluster: Chromosome... 1405 0.0
gnl|LJGI|TC75026 similar to UniRef100_A7P8C2 Cluster: Chromosome... 361 6e-99
gnl|LJGI|TC82323 UniRef100_A7P8C2 Cluster: Chromosome chr3 scaff... 86 6e-16
>gnl|LJGI|TC59175 similar to UniRef100_A7P8C2 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (92%)
Length = 1444
Score = 2290 bits (1155), Expect = 0.0
Identities = 1155/1155 (100%)
Strand = Plus / Plus
Query: 1 atggataggcttctatcatcttcttcacctccttctctcaaaaccctcaacctcaagcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 atggataggcttctatcatcttcttcacctccttctctcaaaaccctcaacctcaagcct 101
Query: 61 tttccatttctcaatcgatctcaatctgccagattcaatttcttcccatcaacacgttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 tttccatttctcaatcgatctcaatctgccagattcaatttcttcccatcaacacgttct 161
Query: 121 tacctcaagcgtggcacctcaatttgttgcaaccaccaaaacccttctccattttcctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 tacctcaagcgtggcacctcaatttgttgcaaccaccaaaacccttctccattttcctct 221
Query: 181 tctagtcccattctcgcatccaaacagcccaataatcttccatctctctcgttttctcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 tctagtcccattctcgcatccaaacagcccaataatcttccatctctctcgttttctcct 281
Query: 241 gataggtcctcacccgaacccaattctctcactcagatctcaactggaactggaactgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 gataggtcctcacccgaacccaattctctcactcagatctcaactggaactggaactgga 341
Query: 301 actggggcttcccaaaaaccaaaggcactaacagctcggacacttgtaatactctctgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 actggggcttcccaaaaaccaaaggcactaacagctcggacacttgtaatactctctgct 401
Query: 361 cttgtcacgatcttaatccaaccagctattgccccagcagcttttgcaacatttcaaact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 cttgtcacgatcttaatccaaccagctattgccccagcagcttttgcaacatttcaaact 461
Query: 421 gctgccaatgccggaggtgcagttggtggaaaactaatccgcactgagctcctaagcagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 gctgccaatgccggaggtgcagttggtggaaaactaatccgcactgagctcctaagcagt 521
Query: 481 gcttggactggcttctttgctggttgcttgcacaccttatcagggcctgaccaccttgcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 gcttggactggcttctttgctggttgcttgcacaccttatcagggcctgaccaccttgcc 581
Query: 541 gctttggctccattatcaattggtcgcacccgaatggagagtgctgctgtgggagccctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 gctttggctccattatcaattggtcgcacccgaatggagagtgctgctgtgggagccctt 641
Query: 601 tggggttgtggccatgatgctggtcaggtcatatttggcttaatatttttaatcctgaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 tggggttgtggccatgatgctggtcaggtcatatttggcttaatatttttaatcctgaag 701
Query: 661 gatcgacttcacattgaaattattcgaacttggggcactagagtggtgggctttaccctg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 gatcgacttcacattgaaattattcgaacttggggcactagagtggtgggctttaccctg 761
Query: 721 ctagtaattggtgctatgggaattagagaagcttcagaagcggctgcaccctctgttgcc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 ctagtaattggtgctatgggaattagagaagcttcagaagcggctgcaccctctgttgcc 821
Query: 781 ttagaaaatggtgaaggtgatgtaaacgtctatgaatcacttgataatccaaaaacacga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 ttagaaaatggtgaaggtgatgtaaacgtctatgaatcacttgataatccaaaaacacga 881
Query: 841 aagaagaagattggttttgctacttttgccaccgggatagttcatggtttgcaaccagat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 882 aagaagaagattggttttgctacttttgccaccgggatagttcatggtttgcaaccagat 941
Query: 901 gcattgatgatggtgttgcctgcccttgctttgccttctcgtttggctggtgctgcattt 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 942 gcattgatgatggtgttgcctgcccttgctttgccttctcgtttggctggtgctgcattt 1001
Query: 961 ctcatcatgttcttatttggaactgtaattgcaatgggaagctatacagtattcataggg 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1002 ctcatcatgttcttatttggaactgtaattgcaatgggaagctatacagtattcataggg 1061
Query: 1021 tcatgtagcgaggcccttaaggataaagtacctaggataactgagaaactcacttgggca 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1062 tcatgtagcgaggcccttaaggataaagtacctaggataactgagaaactcacttgggca 1121
Query: 1081 tcttctcttattgctatagcccttggatttgcgatcattattagccagttttttgggttt 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1122 tcttctcttattgctatagcccttggatttgcgatcattattagccagttttttgggttt 1181
Query: 1141 agtctgtattagcac 1155
|||||||||||||||
Sbjct: 1182 agtctgtattagcac 1196
>gnl|LJGI|TC66549 similar to UniRef100_A7P8C2 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (46%)
Length = 824
Score = 1405 bits (709), Expect = 0.0
Identities = 732/740 (98%), Gaps = 6/740 (0%)
Strand = Plus / Plus
Query: 1 atggataggcttctatcatcttcttcacctccttctctcaaaaccctcaacctcaagcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 atggataggcttctatcatcttcttcacctccttctctcaaaaccctcaacctcaagcct 147
Query: 61 tttccatttctcaatcgatctcaatctgccagattcaatttcttcccatcaacacgttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 tttccatttctcaatcgatctcaatctgccagattcaatttcttcccatcaacacgttct 207
Query: 121 tacctcaagcgtggcacctcaatttgttgcaaccaccaaaacccttctccattttcctct 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 208 tacctcaagcgtggcacctcaatttgttgcaaccaccaaaacccttctccatttacctct 267
Query: 181 tctagtcccattctcgcatccaaacagcccaataatcttccatctctctcgttttctcct 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 268 tctagtcccattctcgcatccaaacagcccaataatcttccatctctctcgtcttctcct 327
Query: 241 gataggtcctcacccgaacccaattctctcactcagatctcaactggaactggaactgga 300
||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 328 gataggtcctcacccgaacccaattctctcactcagatctcaact------ggaactgga 381
Query: 301 actggggcttcccaaaaaccaaaggcactaacagctcggacacttgtaatactctctgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 actggggcttcccaaaaaccaaaggcactaacagctcggacacttgtaatactctctgct 441
Query: 361 cttgtcacgatcttaatccaaccagctattgccccagcagcttttgcaacatttcaaact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 cttgtcacgatcttaatccaaccagctattgccccagcagcttttgcaacatttcaaact 501
Query: 421 gctgccaatgccggaggtgcagttggtggaaaactaatccgcactgagctcctaagcagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gctgccaatgccggaggtgcagttggtggaaaactaatccgcactgagctcctaagcagt 561
Query: 481 gcttggactggcttctttgctggttgcttgcacaccttatcagggcctgaccaccttgcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gcttggactggcttctttgctggttgcttgcacaccttatcagggcctgaccaccttgcc 621
Query: 541 gctttggctccattatcaattggtcgcacccgaatggagagtgctgctgtgggagccctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gctttggctccattatcaattggtcgcacccgaatggagagtgctgctgtgggagccctt 681
Query: 601 tggggttgtggccatgatgctggtcaggtcatatttggcttaatatttttaatcctgaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tggggttgtggccatgatgctggtcaggtcatatttggcttaatatttttaatcctgaag 741
Query: 661 gatcgacttcacattgaaattattcgaacttggggcactagagtggtgggctttaccctg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 gatcgacttcacattgaaattattcgaacttggggcactagagtggtgggctttaccctg 801
Query: 721 ctagtaattggtgctatggg 740
||||||||||||||||||||
Sbjct: 802 ctagtaattggtgctatggg 821
>gnl|LJGI|TC75026 similar to UniRef100_A7P8C2 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 840
Score = 361 bits (182), Expect = 6e-99
Identities = 334/386 (86%), Gaps = 9/386 (2%)
Strand = Plus / Plus
Query: 314 aaaaaccaaaggcactaacagctcggacacttgtaatactctctgctcttgtcacgatct 373
|||| ||||||||| |||||||||||||| ||||| |||||||||||||||| | | | |
Sbjct: 461 aaaacccaaaggcaataacagctcggacatttgtattactctctgctcttgttatgcttt 520
Query: 374 taatccaaccagctattgccccagcagcttttgcaacatttcaaactgctgccaatgccg 433
|||| ||||||||| |||| ||||||||||||||||| || |||| ||| ||||| |||
Sbjct: 521 taattcaaccagcttttgcaccagcagcttttgcaaccttccaaaatgcggccaagaccg 580
Query: 434 gaggtgcagttggtggaaaactaatccgcactgagctcctaagcagtgcttggactggct 493
| ||| | | ||||||||||| |||||| |||| |||||||||||||| |
Sbjct: 581 gtggtcctgc---------actaatccgcaatgagcttgtaagtagtgcttggactggtt 631
Query: 494 tctttgctggttgcttgcacaccttatcagggcctgaccaccttgccgctttggctccat 553
|||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||
Sbjct: 632 tctttgctggttgcttgcacacgctatcggggcctgaccaccttgcagctttggctccat 691
Query: 554 tatcaattggtcgcacccgaatggagagtgctgctgtgggagccctttggggttgtggcc 613
| |||||||| || ||||| ||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 692 tgtcaattggccgtacccggatggagagtgctgctgttggagccctttggggttgcggcc 751
Query: 614 atgatgctggtcaggtcatatttggcttaatatttttaatcctgaaggatcgacttcaca 673
|||||||||| ||||| || ||||||||||||||||| ||||||| |||||||||||||
Sbjct: 752 atgatgctggacaggttatctttggcttaatatttttgctcctgaaagatcgacttcaca 811
Query: 674 ttgaaattattcgaacttggggcact 699
|||||||||||| |||||||||||||
Sbjct: 812 ttgaaattattcaaacttggggcact 837
>gnl|LJGI|TC82323 UniRef100_A7P8C2 Cluster: Chromosome chr3 scaffold_8, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr3 scaffold_8, whole genome shotgun sequence - Vitis
vinifera (Grape), partial (7%)
Length = 321
Score = 85.7 bits (43), Expect = 6e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 1082 cttctcttattgctatagcccttggatttgcgatcattattagccagttttttgggttta 1141
||||||||||||| ||||||||||||||||| ||| |||| ||||||||||| |||||||
Sbjct: 1 cttctcttattgcaatagcccttggatttgccatccttatcagccagtttttcgggttta 60
Query: 1142 gtctgta 1148
| |||||
Sbjct: 61 gcctgta 67