Miyakogusa Predicted Gene
- Lj1g3v3330210.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3330210.1 tr|G7J985|G7J985_MEDTR Cytoplasmic tRNA
2-thiolation protein OS=Medicago truncatula GN=MTR_3g118250
,87.93,0,ATP_bind_3,tRNA(Ile)-lysidine/2-thiocytidine synthase; no
description,Rossmann-like alpha/beta/alpha,CUFF.30464.1
(1053 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65148 homologue to UniRef100_A7NVR9 Cluster: Chromoso... 946 0.0
gnl|LJGI|TC73059 similar to UniRef100_Q6Z6G6 Cluster: N-type ATP... 942 0.0
gnl|LJGI|TC77831 homologue to UniRef100_A7NVR9 Cluster: Chromoso... 712 0.0
gnl|LJGI|AV765423 similar to UniRef100_A7NVR9 Cluster: Chromosom... 119 4e-26
gnl|LJGI|AV774102 similar to UniRef100_A3X841 Cluster: ABC trans... 76 5e-13
>gnl|LJGI|TC65148 homologue to UniRef100_A7NVR9 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 645
Score = 946 bits (477), Expect = 0.0
Identities = 483/485 (99%)
Strand = Plus / Plus
Query: 569 gaggtgatattgctagattgagtagatgcacttcaatcaccactggtgaagatggtccaa 628
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gaggggatattgctagattgagtagatgcacttcaatcaccactggtgaagatggtccaa 62
Query: 629 tccctagatgcaagcctttcaagtacacatatgagaaggagattgtaatgtatgcgtatt 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tccctagatgcaagcctttcaagtacacatatgagaaggagattgtaatgtatgcgtatt 122
Query: 689 tcaagaggctggactacttttcgacagaatgtatttattctccaaatgcatatcgtggtt 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tcaagaggctggactacttttcgacagaatgtatttattctccaaatgcatatcgtggtt 182
Query: 749 ttgctcgagagtttatcaaggatttggaaagaatgagacctagagccattctagacatca 808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ttgctcgagagtttatcaaggatttggaaagaatgagacctagagccattctagacatca 242
Query: 809 tcaaatcaggggagaatttcaggatctctactaccaccaaaatgccggagcagggaacat 868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tcaaatcaggggagaatttcaggatctctactaccaccaaaatgccggagcagggaacat 302
Query: 869 gtgaacgctgtggttatatttctagtcagaaatggtgcaaagcttgtgttctacttgatg 928
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gtgaatgctgtggttatatttctagtcagaaatggtgcaaagcttgtgttctacttgatg 362
Query: 929 gattgaatcgaggtttgcctaagctgggaattggacggagtcggggtggtattggtggta 988
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 gattgaatcgaggtttgcctaagctgggaattggacggagtcggggtggtattggtggta 422
Query: 989 aggatggaaatgaaggtggaaagagcatcgagagcaaacaatgtggaactctggatttct 1048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 aggatggaaatgaaggtggaaagagcatcgagagcaaacaatgtggaactctggatttct 482
Query: 1049 aattt 1053
|||||
Sbjct: 483 aattt 487
>gnl|LJGI|TC73059 similar to UniRef100_Q6Z6G6 Cluster: N-type ATP
pyrophosphatase-like; n=1; Oryza sativa Japonica
Group|Rep: N-type ATP pyrophosphatase-like - Oryza
sativa subsp. japonica (Rice), partial (40%)
Length = 515
Score = 942 bits (475), Expect = 0.0
Identities = 475/475 (100%)
Strand = Plus / Plus
Query: 1 atggaaggtgagggtgagaggaaaagaagaagtttatgctgcgtatgcaatgaaagaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 atggaaggtgagggtgagaggaaaagaagaagtttatgctgcgtatgcaatgaaagaaga 100
Query: 61 ccttccctgaagaggcccaaaacactcgaacacatttgcagggaatgcttctacaccgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 ccttccctgaagaggcccaaaacactcgaacacatttgcagggaatgcttctacaccgtc 160
Query: 121 ttcgaggatgagatccaccaagtcatcgtcaccaacaacctcttccgccgcggcgaacgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 ttcgaggatgagatccaccaagtcatcgtcaccaacaacctcttccgccgcggcgaacgc 220
Query: 181 gtcgccatcggtgcttccggcggcaaagactccaccgtactcgcttacgtcttatccaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 gtcgccatcggtgcttccggcggcaaagactccaccgtactcgcttacgtcttatccaaa 280
Query: 241 ctcaaccgcgtccacgattacggcctccacctcttcctcttgtccgtcgacgaaggcatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 ctcaaccgcgtccacgattacggcctccacctcttcctcttgtccgtcgacgaaggcatc 340
Query: 301 accggctaccgcgacgactcgctccaaaccgttcacagaaaccagattcagtacggtttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 accggctaccgcgacgactcgctccaaaccgttcacagaaaccagattcagtacggtttg 400
Query: 361 cccctccaagtcgtctcctacatggacctctacggttggaccatggatgacatcgtcaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 cccctccaagtcgtctcctacatggacctctacggttggaccatggatgacatcgtcaag 460
Query: 421 cttattggtctcaagaacaactgcacgttctgcggtgtcttccgccgtcaggcac 475
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 cttattggtctcaagaacaactgcacgttctgcggtgtcttccgccgtcaggcac 515
>gnl|LJGI|TC77831 homologue to UniRef100_A7NVR9 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 758
Score = 712 bits (359), Expect = 0.0
Identities = 362/363 (99%)
Strand = Plus / Plus
Query: 691 aagaggctggactacttttcgacagaatgtatttattctccaaatgcatatcgtggtttt 750
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 9 aagaggctggactacttttcgacagaatgtattcattctccaaatgcatatcgtggtttt 68
Query: 751 gctcgagagtttatcaaggatttggaaagaatgagacctagagccattctagacatcatc 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 gctcgagagtttatcaaggatttggaaagaatgagacctagagccattctagacatcatc 128
Query: 811 aaatcaggggagaatttcaggatctctactaccaccaaaatgccggagcagggaacatgt 870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 aaatcaggggagaatttcaggatctctactaccaccaaaatgccggagcagggaacatgt 188
Query: 871 gaacgctgtggttatatttctagtcagaaatggtgcaaagcttgtgttctacttgatgga 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 gaacgctgtggttatatttctagtcagaaatggtgcaaagcttgtgttctacttgatgga 248
Query: 931 ttgaatcgaggtttgcctaagctgggaattggacggagtcggggtggtattggtggtaag 990
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ttgaatcgaggtttgcctaagctgggaattggacggagtcggggtggtattggtggtaag 308
Query: 991 gatggaaatgaaggtggaaagagcatcgagagcaaacaatgtggaactctggatttctaa 1050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gatggaaatgaaggtggaaagagcatcgagagcaaacaatgtggaactctggatttctaa 368
Query: 1051 ttt 1053
|||
Sbjct: 369 ttt 371
>gnl|LJGI|AV765423 similar to UniRef100_A7NVR9 Cluster: Chromosome chr18 scaffold_1
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:,
partial (4%)
Length = 372
Score = 119 bits (60), Expect = 4e-26
Identities = 72/76 (94%)
Strand = Plus / Minus
Query: 978 tattggtggtaaggatggaaatgaaggtggaaagagcatcgagagcaaacaatgtggaac 1037
||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 372 tattggtggtaaggatgaaaataaaggtggaaagagcatcgagagcaaacaatgtggaac 313
Query: 1038 tctggatttctaattt 1053
| ||||||| ||||||
Sbjct: 312 tttggatttttaattt 297
>gnl|LJGI|AV774102 similar to UniRef100_A3X841 Cluster: ABC transporter permease
protein; n=1; Roseobacter sp. MED193|Rep: ABC
transporter, partial (4%)
Length = 364
Score = 75.8 bits (38), Expect = 5e-13
Identities = 70/77 (90%), Gaps = 4/77 (5%)
Strand = Plus / Minus
Query: 981 tggtggtaaggatggaaatgaa-ggtggaaaga-gcatcgagagcaaac--aatgtggaa 1036
|||||||||||||||||||||| |||||||||| ||||||||||| ||| | | |||||
Sbjct: 364 tggtggtaaggatggaaatgaaaggtggaaagaagcatcgagagccaacccactctggaa 305
Query: 1037 ctctggatttctaattt 1053
|||||||||||||||||
Sbjct: 304 ctctggatttctaattt 288