Miyakogusa Predicted Gene
- Lj1g3v3330180.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3330180.2 Non Chatacterized Hit- tr|I1K6W0|I1K6W0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.6710
PE=,84.41,0,seg,NULL; tRNA-synt_2c,Alanyl-tRNA synthetase, class IIc,
N-terminal; tRNA_SAD,Threonyl/alanyl tRNA ,CUFF.30463.2
(2925 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS318298 similar to UniRef100_A7P8L7 Cluster: Chromosom... 882 0.0
gnl|LJGI|AV409818 similar to UniRef100_A7P8L7 Cluster: Chromosom... 632 e-180
gnl|LJGI|TC70320 similar to UniRef100_A7P8L7 Cluster: Chromosome... 472 e-132
gnl|LJGI|AV780046 similar to UniRef100_A7P8L7 Cluster: Chromosom... 155 2e-36
>gnl|LJGI|FS318298 similar to UniRef100_A7P8L7 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 716
Score = 882 bits (445), Expect = 0.0
Identities = 472/483 (97%), Gaps = 11/483 (2%)
Strand = Plus / Plus
Query: 86 ttggatttctctcgcccaaacaacaaatactactactacctcgacctcgacatcgttttc 145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 ttggatttctctcgcccaaacaacaaatactactactacctcgacctcgacatcgttttc 293
Query: 146 gctttcgctttcgcacatcatcgaattcgcaggcacagtcccttcctgaagaacaagaac 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 gctttcgctttcgcacatcatcgaattcgcaggcacagtcccttcctgaagaacaagaac 353
Query: 206 aagaacaagaagagttgctcacagtgagtggagattccattcgtgacaggtttctccgtt 265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 aagaacaagaagagttgctcacagtgagtggagattccattcgtgacaggtttctccgtt 413
Query: 266 tctatgcttcccgtggtcacaaggttcttcccagtgcttctctcatcccagatgatccca 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 tctatgcttcccgtggtcacaaggttcttcccagtgcttctctcatcccagatgatccca 473
Query: 326 ccgtcctcctcactatcgctggcatgcttcagttcaagcctatcttcctaggca------ 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 ccgtcctcctcactatcgctggcatgcttcagttcaagcctatcttcctaggcaaggtaa 533
Query: 380 -----agattcccaggcaagtatctcgtgctactacttctcaaaggtgcatacgtactaa 434
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 gcaccagattcccaggcaagtatctcgtgctactacttctcaaaggtgcatacgtactaa 593
Query: 435 cgatatcaacaacgttggccttacttctcgacatcaaaccttttttgagatgcttggtaa 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 cgatatcaacaacgttggccttacttctcgacatcaaaccttttttgagatgcttggtaa 653
Query: 495 cttcagctttggtgattacttcaaaaaacaagctattcaatgggcatgggagctctctac 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 cttcagctttggtgattacttcaaaaaacaagctattcaatgggcatgggagctctctac 713
Query: 555 ctt 557
|||
Sbjct: 714 ctt 716
Score = 87.7 bits (44), Expect = 4e-16
Identities = 44/44 (100%)
Strand = Plus / Plus
Query: 1 atggaaggtttagcgtttcaactgttgcacattccaaaacttgc 44
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 atggaaggtttagcgtttcaactgttgcacattccaaaacttgc 186
>gnl|LJGI|AV409818 similar to UniRef100_A7P8L7 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 408
Score = 632 bits (319), Expect = e-180
Identities = 319/319 (100%)
Strand = Plus / Plus
Query: 86 ttggatttctctcgcccaaacaacaaatactactactacctcgacctcgacatcgttttc 145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 ttggatttctctcgcccaaacaacaaatactactactacctcgacctcgacatcgttttc 149
Query: 146 gctttcgctttcgcacatcatcgaattcgcaggcacagtcccttcctgaagaacaagaac 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 gctttcgctttcgcacatcatcgaattcgcaggcacagtcccttcctgaagaacaagaac 209
Query: 206 aagaacaagaagagttgctcacagtgagtggagattccattcgtgacaggtttctccgtt 265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 aagaacaagaagagttgctcacagtgagtggagattccattcgtgacaggtttctccgtt 269
Query: 266 tctatgcttcccgtggtcacaaggttcttcccagtgcttctctcatcccagatgatccca 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tctatgcttcccgtggtcacaaggttcttcccagtgcttctctcatcccagatgatccca 329
Query: 326 ccgtcctcctcactatcgctggcatgcttcagttcaagcctatcttcctaggcaagattc 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ccgtcctcctcactatcgctggcatgcttcagttcaagcctatcttcctaggcaagattc 389
Query: 386 ccaggcaagtatctcgtgc 404
|||||||||||||||||||
Sbjct: 390 ccaggcaagtatctcgtgc 408
Score = 87.7 bits (44), Expect = 4e-16
Identities = 44/44 (100%)
Strand = Plus / Plus
Query: 1 atggaaggtttagcgtttcaactgttgcacattccaaaacttgc 44
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 atggaaggtttagcgtttcaactgttgcacattccaaaacttgc 48
>gnl|LJGI|TC70320 similar to UniRef100_A7P8L7 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (8%)
Length = 523
Score = 472 bits (238), Expect = e-132
Identities = 238/238 (100%)
Strand = Plus / Plus
Query: 2688 tgtactgggctcatgtccaggtgaagggaaggttagtctagtggctgcttttactccagg 2747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtactgggctcatgtccaggtgaagggaaggttagtctagtggctgcttttactccagg 60
Query: 2748 ggtggttgatcgagggattcaggcaggtaagtttattgggcaaatagcaaagttatgtgg 2807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggtggttgatcgagggattcaggcaggtaagtttattgggcaaatagcaaagttatgtgg 120
Query: 2808 tggcggcggaggtggaaggcctaattttgctcaggctggtgggaggaagcctgaaaactt 2867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tggcggcggaggtggaaggcctaattttgctcaggctggtgggaggaagcctgaaaactt 180
Query: 2868 gaccagtgctctcgagaaggcaaaatccgagctgatagctactctatctgaaaaatga 2925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaccagtgctctcgagaaggcaaaatccgagctgatagctactctatctgaaaaatga 238
>gnl|LJGI|AV780046 similar to UniRef100_A7P8L7 Cluster: Chromosome chr3 scaffold_8
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:,
partial (2%)
Length = 553
Score = 155 bits (78), Expect = 2e-36
Identities = 126/134 (94%), Gaps = 6/134 (4%)
Strand = Plus / Minus
Query: 2712 agggaaggttagtctagtggctgcttttactccaggggtggttgatcgagggattcaggc 2771
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 553 agggaaggttagtctagtggctgcttttacttcagggctggttgatcgagggattcaggc 494
Query: 2772 a-ggtaa-gtttattgggc-aaatagcaaagttat-gtggtggcggcgga-ggtggaagg 2826
| ||||| ||||||||||| ||||||||||||||| |||||||||||||| |||||||||
Sbjct: 493 acggtaacgtttattgggctaaatagcaaagttatagtggtggcggcggacggtggaagg 434
Query: 2827 cc-taattttgctc 2839
|| |||||||||||
Sbjct: 433 ccgtaattttgctc 420