Miyakogusa Predicted Gene
- Lj1g3v3330170.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3330170.1 Non Chatacterized Hit- tr|I3S6J8|I3S6J8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,100,0,RIBOSOMAL_S3,Ribosomal protein S3, conserved site;
Ribosomal_S3_C,Ribosomal protein S3, C-terminal; ,CUFF.30468.1
(642 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57325 homologue to UniRef100_A7PDZ8 Cluster: Chromoso... 1259 0.0
gnl|LJGI|TC58682 homologue to UniRef100_A7PDZ8 Cluster: Chromoso... 765 0.0
gnl|LJGI|TC70085 homologue to UniRef100_A7PDZ8 Cluster: Chromoso... 749 0.0
gnl|LJGI|GO020596 homologue to UniRef100_A7PDZ8 Cluster: Chromos... 438 e-122
gnl|LJGI|TC67712 homologue to UniRef100_A7PDZ8 Cluster: Chromoso... 317 5e-86
>gnl|LJGI|TC57325 homologue to UniRef100_A7PDZ8 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (95%)
Length = 1025
Score = 1259 bits (635), Expect = 0.0
Identities = 642/643 (99%), Gaps = 1/643 (0%)
Strand = Plus / Plus
Query: 1 atggcaactcaaatgagcaagaagagaaagtttgtggctgatggcgttttcttcgctgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 atggcaactcaaatgagcaagaagagaaagtttgtggctgatggcgttttcttcgctgaa 139
Query: 61 ctgaacgaggttctcacccgcgagctcgctgaggacggttactccggtgtggaggttagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 ctgaacgaggttctcacccgcgagctcgctgaggacggttactccggtgtggaggttagg 199
Query: 121 gttactccggtgaaaactgagatcatcatcagagccactcgaacccaagccgttctaggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 gttactccggtgaaaactgagatcatcatcagagccactcgaacccaagccgttctaggt 259
Query: 181 gagaagggtaggagaattagggagcttacctcagtggtatcgaagaggttcaagtttcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gagaagggtaggagaattagggagcttacctcagtggtatcgaagaggttcaagtttcct 319
Query: 241 gaaaacagtgtggaactctatgctgaaaaggttaacaacagaggcctttgtgccattgcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gaaaacagtgtggaactctatgctgaaaaggttaacaacagaggcctttgtgccattgcc 379
Query: 301 caagccgagtctctccgctacaagctccttggtggcctcgccgtaaggagggcttgctat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 caagccgagtctctccgctacaagctccttggtggcctcgccgtaaggagggcttgctat 439
Query: 361 ggtgttttgagatttgttatggaaagtggagccaagggatgtgaggtgattgttagtgga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ggtgttttgagatttgttatggaaagtggagccaagggatgtgaggtgattgttagtgga 499
Query: 421 aaactgagagcacagagagccaaatctatgaagttcaaggatgggtacatgatttcttct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aaactgagagcacagagagccaaatctatgaagttcaaggatgggtacatgatttcttct 559
Query: 481 gggcaaccagtcaaggattaca-ttgactctgcagtgagacatgtgctcctcagacaggg 539
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 560 gggcaaccagtcaaggattacatttgactctgcagtgagacatgtgctcctcagacaggg 619
Query: 540 tgtacttggtatcaaggttaagattatgcttgactgggatcctaaagggaaacagggtcc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tgtacttggtatcaaggttaagattatgcttgactgggatcctaaagggaaacagggtcc 679
Query: 600 taaaactcccctccctgatattgttacaatccactctccgaag 642
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 taaaactcccctccctgatattgttacaatccactctccgaag 722
>gnl|LJGI|TC58682 homologue to UniRef100_A7PDZ8 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (95%)
Length = 1079
Score = 765 bits (386), Expect = 0.0
Identities = 575/638 (90%)
Strand = Plus / Plus
Query: 1 atggcaactcaaatgagcaagaagagaaagtttgtggctgatggcgttttcttcgctgaa 60
|||||||| ||||| ||||||||| |||||||||| ||||| ||||| ||||||||||||
Sbjct: 84 atggcaacccaaatcagcaagaagcgaaagtttgtcgctgacggcgtcttcttcgctgaa 143
Query: 61 ctgaacgaggttctcacccgcgagctcgctgaggacggttactccggtgtggaggttagg 120
||||||||||||| || || |||||||||||||| || ||||| |||||||||||||||
Sbjct: 144 ttgaacgaggttctgacacgagagctcgctgaggatggatactctggtgtggaggttagg 203
Query: 121 gttactccggtgaaaactgagatcatcatcagagccactcgaacccaagccgttctaggt 180
||||| ||| ||||||| |||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 204 gttaccccgatgaaaaccgagatcatcatcagagccactcgaactcaagccgttctcggt 263
Query: 181 gagaagggtaggagaattagggagcttacctcagtggtatcgaagaggttcaagtttcct 240
|||||||| ||||| ||||||||||||||||| ||||| ||||||||| |||||||||
Sbjct: 264 gagaagggaaggaggattagggagcttacctctgtggtgcagaagaggtttaagtttcct 323
Query: 241 gaaaacagtgtggaactctatgctgaaaaggttaacaacagaggcctttgtgccattgcc 300
|| |||||||| || ||||||||||| |||||||| ||||| || |||||||| ||||||
Sbjct: 324 gagaacagtgttgagctctatgctgagaaggttaataacagggggctttgtgctattgcc 383
Query: 301 caagccgagtctctccgctacaagctccttggtggcctcgccgtaaggagggcttgctat 360
|| || |||||||| ||||||||||| ||||||||||| || ||| ||||||||||||||
Sbjct: 384 caggctgagtctcttcgctacaagcttcttggtggccttgctgtacggagggcttgctat 443
Query: 361 ggtgttttgagatttgttatggaaagtggagccaagggatgtgaggtgattgttagtgga 420
|||||| |||||||||||||||| ||||| || |||||||||||||| || || ||||||
Sbjct: 444 ggtgttctgagatttgttatggagagtggcgcgaagggatgtgaggtcatagtcagtgga 503
Query: 421 aaactgagagcacagagagccaaatctatgaagttcaaggatgggtacatgatttcttct 480
|| ||||||| |||||||| ||||| ||||||||||||||||| |||||||||||||||
Sbjct: 504 aagttgagagcccagagagctaaatccatgaagttcaaggatggatacatgatttcttct 563
Query: 481 gggcaaccagtcaaggattacattgactctgcagtgagacatgtgctcctcagacagggt 540
||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 564 gggcagccagtcaaggattacattgactctgcagtgagacacgtgctactcagacagggt 623
Query: 541 gtacttggtatcaaggttaagattatgcttgactgggatcctaaagggaaacagggtcct 600
||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 624 gtacttggtattaaggtgaagatcatgcttgactgggatcctaaagggaaacagggtcct 683
Query: 601 aaaactcccctccctgatattgttacaatccactctcc 638
|||||||| || ||||||||||| ||||||||| ||||
Sbjct: 684 aaaactccacttcctgatattgtcacaatccacactcc 721
>gnl|LJGI|TC70085 homologue to UniRef100_A7PDZ8 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), complete
Length = 1176
Score = 749 bits (378), Expect = 0.0
Identities = 573/638 (89%)
Strand = Plus / Plus
Query: 1 atggcaactcaaatgagcaagaagagaaagtttgtggctgatggcgttttcttcgctgaa 60
|||||||| ||||||||||||||| ||||||||||||| ||||| || |||||||| |||
Sbjct: 115 atggcaacccaaatgagcaagaagcgaaagtttgtggcggatggagtgttcttcgccgaa 174
Query: 61 ctgaacgaggttctcacccgcgagctcgctgaggacggttactccggtgtggaggttagg 120
|||||||||||||||||| | ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 175 ctgaacgaggttctcaccagagagcttgctgaggatggttactccggtgtggaggtcagg 234
Query: 121 gttactccggtgaaaactgagatcatcatcagagccactcgaacccaagccgttctaggt 180
||||| || || || |||||||||||||||||||| ||||||| || ||||| |||
Sbjct: 235 gttacccctgtccgcaccgagatcatcatcagagccaccagaacccaggctgttcttggt 294
Query: 181 gagaagggtaggagaattagggagcttacctcagtggtatcgaagaggttcaagtttcct 240
|||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||||
Sbjct: 295 gagaagggaaggagaattagggagcttacctcaattgtacagaagaggttcaagtttcct 354
Query: 241 gaaaacagtgtggaactctatgctgaaaaggttaacaacagaggcctttgtgccattgcc 300
|| || | |||||||||||||||||| ||||| || |||||||| || ||||| |||||
Sbjct: 355 gagaataatgtggaactctatgctgagaaggtgaataacagagggctctgtgctattgct 414
Query: 301 caagccgagtctctccgctacaagctccttggtggcctcgccgtaaggagggcttgctat 360
|| || |||||||||||||||||||||||||||||||| || ||| | ||||||||||||
Sbjct: 415 caggctgagtctctccgctacaagctccttggtggccttgctgtacgcagggcttgctat 474
Query: 361 ggtgttttgagatttgttatggaaagtggagccaagggatgtgaggtgattgttagtgga 420
|||||| |||||||||||||||||||||| || |||||||||||||| ||||| ||||||
Sbjct: 475 ggtgttctgagatttgttatggaaagtggtgctaagggatgtgaggtaattgtcagtgga 534
Query: 421 aaactgagagcacagagagccaaatctatgaagttcaaggatgggtacatgatttcttct 480
||| ||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 535 aaattgagagcccagagggccaaatccatgaagttcaaggatgggtacatgatttcttct 594
Query: 481 gggcaaccagtcaaggattacattgactctgcagtgagacatgtgctcctcagacagggt 540
|| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 595 ggccaaccagtcaaggattacattgactctgcagtgagacatgtgctccttagacagggt 654
Query: 541 gtacttggtatcaaggttaagattatgcttgactgggatcctaaagggaaacagggtcct 600
|| |||||||||||||||||||| ||||| || |||||||||||||| |||||||||||
Sbjct: 655 gttcttggtatcaaggttaagatcatgctcgattgggatcctaaaggtaaacagggtccc 714
Query: 601 aaaactcccctccctgatattgttacaatccactctcc 638
||||| |||||||| |||||||| ||||||||| ||||
Sbjct: 715 aaaacccccctcccggatattgtcacaatccacactcc 752
>gnl|LJGI|GO020596 homologue to UniRef100_A7PDZ8 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (56%)
Length = 518
Score = 438 bits (221), Expect = e-122
Identities = 347/389 (89%)
Strand = Plus / Plus
Query: 1 atggcaactcaaatgagcaagaagagaaagtttgtggctgatggcgttttcttcgctgaa 60
|||||||| ||||| ||||||||| |||||||||| ||||| ||||| ||||||||||||
Sbjct: 127 atggcaacccaaatcagcaagaagcgaaagtttgtcgctgacggcgtcttcttcgctgaa 186
Query: 61 ctgaacgaggttctcacccgcgagctcgctgaggacggttactccggtgtggaggttagg 120
||||||||||||| || || |||||||||||||| || ||||| |||||||||||||||
Sbjct: 187 ttgaacgaggttctgacacgagagctcgctgaggatggatactctggtgtggaggttagg 246
Query: 121 gttactccggtgaaaactgagatcatcatcagagccactcgaacccaagccgttctaggt 180
||||| ||| ||||||| |||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 247 gttaccccgatgaaaaccgagatcatcatcagagccactcgaactcaagccgttctcggt 306
Query: 181 gagaagggtaggagaattagggagcttacctcagtggtatcgaagaggttcaagtttcct 240
|||||||| ||||| ||||||||||||||||| ||||| ||||||||| |||||||||
Sbjct: 307 gagaagggaaggaggattagggagcttacctctgtggtgcagaagaggtttaagtttcct 366
Query: 241 gaaaacagtgtggaactctatgctgaaaaggttaacaacagaggcctttgtgccattgcc 300
|| |||||||| || ||||||||||| |||||||| ||||| || |||||||| ||||||
Sbjct: 367 gagaacagtgttgagctctatgctgagaaggttaataacagggggctttgtgctattgcc 426
Query: 301 caagccgagtctctccgctacaagctccttggtggcctcgccgtaaggagggcttgctat 360
|| || |||||||| ||||||||||| ||||||||||| || ||| ||||||||||||||
Sbjct: 427 caggctgagtctcttcgctacaagcttcttggtggccttgctgtacggagggcttgctat 486
Query: 361 ggtgttttgagatttgttatggaaagtgg 389
|||||| |||||||||||||||| |||||
Sbjct: 487 ggtgttctgagatttgttatggagagtgg 515
>gnl|LJGI|TC67712 homologue to UniRef100_A7PDZ8 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (36%)
Length = 903
Score = 317 bits (160), Expect = 5e-86
Identities = 232/257 (90%), Gaps = 8/257 (3%)
Strand = Plus / Plus
Query: 90 tgaggacggttactccggtgtggaggttagggttactccggtgaaaactgagatcatcat 149
||||||| | ||||| ||||||||||||||||| ||||| | ||||||||||||||||||
Sbjct: 88 tgaggacagatactcgggtgtggaggttagggtcactccagcgaaaactgagatcatcat 147
Query: 150 cagagccactcgaacccaagccgttct--------aggtgagaagggtaggagaattagg 201
|||||||||||||||||| | ||||| |||||||||||| ||||||||||||
Sbjct: 148 cagagccactcgaacccaggaggttctagacttctaggtgagaagggaaggagaattagg 207
Query: 202 gagcttacctcagtggtatcgaagaggttcaagtttcctgaaaacagtgtggaactctat 261
|||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 208 gagcttaccttagtggtatcgaagaggttcaagtttcctgaaaacagtgtagaactctat 267
Query: 262 gctgaaaaggttaacaacagaggcctttgtgccattgcccaagccgagtctctccgctac 321
||||||||||| |||||||| ||||||||||| ||||||||||| ||||| |||||||||
Sbjct: 268 gctgaaaaggtcaacaacaggggcctttgtgctattgcccaagcggagtccctccgctac 327
Query: 322 aagctccttggtggcct 338
|||||||||||||||||
Sbjct: 328 aagctccttggtggcct 344