Miyakogusa Predicted Gene

Lj1g3v3329610.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3329610.1 tr|A2Q2S4|A2Q2S4_MEDTR U box OS=Medicago
truncatula GN=MTR_7g005940 PE=4 SV=1,63.06,0,WDSAM1 PROTEIN,NULL;
U-box,U box domain; no description,Zinc finger, RING/FYVE/PHD-type;
ZF_SWIM,Zin,CUFF.30405.1
         (3120 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC600039 similar to UniRef100_A2Q2S4 Cluster: U box; n=...   823   0.0  
gnl|LJGI|BP084536 similar to UniRef100_A2Q2S4 Cluster: U box; n=...   418   e-116

>gnl|LJGI|DC600039 similar to UniRef100_A2Q2S4 Cluster: U box; n=1; Medicago
           truncatula|Rep: U box - Medicago truncatula (Barrel
           medic), partial (3%)
          Length = 573

 Score =  823 bits (415), Expect = 0.0
 Identities = 415/415 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcttcatctttagaggagcttcttgcaaaggaagggttcaaaggaagcagaagagtc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 atggcttcatctttagaggagcttcttgcaaaggaagggttcaaaggaagcagaagagtc 218

                                                                       
Query: 61  acaaaggctcgatcttccttccaccatggtgcttcaagtgagccactccactctttggaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 acaaaggctcgatcttccttccaccatggtgcttcaagtgagccactccactctttggaa 278

                                                                       
Query: 121 gatagactttgtgtatcaggtgatagaattaaaacacacagaacaaagtccaatgactca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gatagactttgtgtatcaggtgatagaattaaaacacacagaacaaagtccaatgactca 338

                                                                       
Query: 181 ctacatcagtttagaagtagattgtcaaaaagtgatactcactctgctaagaaccagagg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ctacatcagtttagaagtagattgtcaaaaagtgatactcactctgctaagaaccagagg 398

                                                                       
Query: 241 ccaagagataatgattttacaggagacaaaaatgatgaaccgttgaagaacgagactgag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ccaagagataatgattttacaggagacaaaaatgatgaaccgttgaagaacgagactgag 458

                                                                       
Query: 301 aagaaatcttcaagggactcaaacgcaggcaaaagatttgataaaaaatcatcagaagac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 aagaaatcttcaagggactcaaacgcaggcaaaagatttgataaaaaatcatcagaagac 518

                                                                  
Query: 361 aagtcaaggtatggggtgagtgggaaagaagatggtagatttgatgatgtttatt 415
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 aagtcaaggtatggggtgagtgggaaagaagatggtagatttgatgatgtttatt 573


>gnl|LJGI|BP084536 similar to UniRef100_A2Q2S4 Cluster: U box; n=1; Medicago
            truncatula|Rep: U box - Medicago truncatula (Barrel
            medic), partial (6%)
          Length = 448

 Score =  418 bits (211), Expect = e-116
 Identities = 214/215 (99%)
 Strand = Plus / Minus

                                                                        
Query: 2906 tcagctctcagttgaaaagaatcttggaaaatggagaaattgaactcaagattctttcat 2965
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448  tcagctctcagttgaaaagaatcttggaaaatggagaaattgaactcaagattctttcat 389

                                                                        
Query: 2966 ctgtgtccttgcttaacttcagtaaaatatcagaatgcagaatgattttgaagacaatgg 3025
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 388  ctgtgtccttgcttaacttcagtaaaatatcagaatgcagaatgattttgaagaccatgg 329

                                                                        
Query: 3026 cagaagatattgctccccttctttgtggacttgttgatgtaacatggactgcaaaacagt 3085
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328  cagaagatattgctccccttctttgtggacttgttgatgtaacatggactgcaaaacagt 269

                                               
Query: 3086 tgcatgccattgtgtctagggagaatctgtagcat 3120
            |||||||||||||||||||||||||||||||||||
Sbjct: 268  tgcatgccattgtgtctagggagaatctgtagcat 234