Miyakogusa Predicted Gene
- Lj1g3v3329520.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3329520.1 tr|G7IZF9|G7IZF9_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_3g0,76.57,0,PPR,Pentatricopeptide repeat;
PPR_2,Pentatricopeptide repeat; DYW_deaminase,NULL; no
description,Tet,CUFF.30395.1
(3123 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS347356 similar to UniRef100_A7QD49 Cluster: Chromosom... 1233 0.0
gnl|LJGI|FS320658 weakly similar to UniRef100_Q9SA46 Cluster: F3... 1041 0.0
>gnl|LJGI|FS347356 similar to UniRef100_A7QD49 Cluster: Chromosome undetermined
scaffold_80, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_80, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(22%)
Length = 622
Score = 1233 bits (622), Expect = 0.0
Identities = 622/622 (100%)
Strand = Plus / Minus
Query: 2325 tctgtctgcatgcagccatggggggttggtggatgagggtcttgcatacttctcttcaat 2384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tctgtctgcatgcagccatggggggttggtggatgagggtcttgcatacttctcttcaat 563
Query: 2385 gactactgaatttggtgtccccgttggaatagagcattgtgtatgcataattgatcttct 2444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gactactgaatttggtgtccccgttggaatagagcattgtgtatgcataattgatcttct 503
Query: 2445 tgggcgttctggaaggcttgcggaggctgaaacttttattaacaagatgccgattccacc 2504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tgggcgttctggaaggcttgcggaggctgaaacttttattaacaagatgccgattccacc 443
Query: 2505 aaatgacctcgtgtggcgtagcctgttagctgcgtgtaaaactcatggtgatttggaccg 2564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aaatgacctcgtgtggcgtagcctgttagctgcgtgtaaaactcatggtgatttggaccg 383
Query: 2565 tggaaggaaagcagctaaccgtctttttgagctggactcatccgatgattcagcatatgt 2624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tggaaggaaagcagctaaccgtctttttgagctggactcatccgatgattcagcatatgt 323
Query: 2625 tctttactccaatgtctgtgcatctaccagaaggtggggagatgtagagaatgtgagaaa 2684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tctttactccaatgtctgtgcatctaccagaaggtggggagatgtagagaatgtgagaaa 263
Query: 2685 gcaaatggaaacacaaaacattaagaagaaacctgcctgtagttggatcaagttgaaaaa 2744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gcaaatggaaacacaaaacattaagaagaaacctgcctgtagttggatcaagttgaaaaa 203
Query: 2745 caaggttacttctttcggaatgggagaccattttcatccacaagtagcacaaatcgatgc 2804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 caaggttacttctttcggaatgggagaccattttcatccacaagtagcacaaatcgatgc 143
Query: 2805 aaagttggaggagctcaagaagatgattagagaggcaggctatgtgcctgacacaagcta 2864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 aaagttggaggagctcaagaagatgattagagaggcaggctatgtgcctgacacaagcta 83
Query: 2865 tgttttgcaagatacagatgaagaacaaaaggagcataatctttggaatcatagtgagag 2924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 tgttttgcaagatacagatgaagaacaaaaggagcataatctttggaatcatagtgagag 23
Query: 2925 aattgcacttgcatttgggttg 2946
||||||||||||||||||||||
Sbjct: 22 aattgcacttgcatttgggttg 1
>gnl|LJGI|FS320658 weakly similar to UniRef100_Q9SA46 Cluster: F3O9.28; n=1;
Arabidopsis thaliana|Rep: F3O9.28 - Arabidopsis thaliana
(Mouse-ear cress), partial (11%)
Length = 671
Score = 1041 bits (525), Expect = 0.0
Identities = 525/525 (100%)
Strand = Plus / Plus
Query: 1 atgacaacaaataatttggcagtgacccatttgcagtttttatttaccaggcttcattat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 atgacaacaaataatttggcagtgacccatttgcagtttttatttaccaggcttcattat 206
Query: 61 ttggctaggcattgtagaagaaacctttctactcttgctctagttcacactcagaaccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ttggctaggcattgtagaagaaacctttctactcttgctctagttcacactcagaaccag 266
Query: 121 aaccagttcaatacatgtacaaaacaaaaaggtggcttctattgccctctcaaagaccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aaccagttcaatacatgtacaaaacaaaaaggtggcttctattgccctctcaaagaccac 326
Query: 181 cctaacccccaactttcatgctttcctcaaaagggtttctcacaaatcactcaacaaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 cctaacccccaactttcatgctttcctcaaaagggtttctcacaaatcactcaacaaatt 386
Query: 241 cttggcaaagcattgcatgccttttgtgtcaaaggtgttattcaactttctacattcgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 cttggcaaagcattgcatgccttttgtgtcaaaggtgttattcaactttctacattcgat 446
Query: 301 gcaaacaccttggttaccatgtactctaagcttggtaacattcaatatgcacatcacgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gcaaacaccttggttaccatgtactctaagcttggtaacattcaatatgcacatcacgta 506
Query: 361 ttcgataaaatgcaaaacagaaatgaagcttcttggaataacatgatgtcgggctttgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ttcgataaaatgcaaaacagaaatgaagcttcttggaataacatgatgtcgggctttgtt 566
Query: 421 cgagttcgttgctaccatgaagcaatgcaattcttctgctacatgtgtcaatatggtgtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 cgagttcgttgctaccatgaagcaatgcaattcttctgctacatgtgtcaatatggtgtc 626
Query: 481 aagcctaccggttatgttgtttctagtttggtgtctgcctttgct 525
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 aagcctaccggttatgttgtttctagtttggtgtctgcctttgct 671