Miyakogusa Predicted Gene
- Lj1g3v3329390.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3329390.1 Non Chatacterized Hit- tr|G7KSG0|G7KSG0_MEDTR
Helicase, putative OS=Medicago truncatula
GN=MTR_7g080,89.54,0,DEAD-like helicases superfamily,Helicase,
superfamily 1/2, ATP-binding domain; helicase superfamily
,CUFF.30387.1
(2949 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO023184 similar to UniRef100_A7PG35 Cluster: Chromosom... 1057 0.0
gnl|LJGI|TC71473 homologue to UniRef100_A7PG35 Cluster: Chromoso... 440 e-122
gnl|LJGI|BP067004 weakly similar to UniRef100_A7PG35 Cluster: Ch... 392 e-108
>gnl|LJGI|GO023184 similar to UniRef100_A7PG35 Cluster: Chromosome chr6 scaffold_15,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_15, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 538
Score = 1057 bits (533), Expect = 0.0
Identities = 533/533 (100%)
Strand = Plus / Plus
Query: 2211 ggctttggagagcctatttgaaaagcatgaaattgcgaagtcaccacttataaagcagaa 2270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggctttggagagcctatttgaaaagcatgaaattgcgaagtcaccacttataaagcagaa 61
Query: 2271 gttaaaggttttacagaggaagcaagaactgactgcaaggataaagtccattaagaaaac 2330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gttaaaggttttacagaggaagcaagaactgactgcaaggataaagtccattaagaaaac 121
Query: 2331 aataagatcttctactgttttagccttcaaggatgaacttaaggcaagaaagagggttct 2390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aataagatcttctactgttttagccttcaaggatgaacttaaggcaagaaagagggttct 181
Query: 2391 tcgcaggctaggatatgctacaagtgacaatgtggtggaattgaaagggaaggttgcttg 2450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tcgcaggctaggatatgctacaagtgacaatgtggtggaattgaaagggaaggttgcttg 241
Query: 2451 tgaaattagtagtgcagatgaactgatcttaacagaactaatgttcagtggtgtgttaaa 2510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tgaaattagtagtgcagatgaactgatcttaacagaactaatgttcagtggtgtgttaaa 301
Query: 2511 ggacataaaggttgaggaaatggtttctctcctctcttgtttggtctggcgagaaaaaat 2570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ggacataaaggttgaggaaatggtttctctcctctcttgtttggtctggcgagaaaaaat 361
Query: 2571 tcatgacggtgccaagcctcgggaggaacttgatctgctttttgcacaattacaagacac 2630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tcatgacggtgccaagcctcgggaggaacttgatctgctttttgcacaattacaagacac 421
Query: 2631 tgctcggagagttgcccaacttcagcttgaatgcaaggtggaaattgatgttgagagctt 2690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tgctcggagagttgcccaacttcagcttgaatgcaaggtggaaattgatgttgagagctt 481
Query: 2691 cgtgaaatcgtttaggcctgatattatggaggctgtgtatgcgtgggcgaaag 2743
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 cgtgaaatcgtttaggcctgatattatggaggctgtgtatgcgtgggcgaaag 534
>gnl|LJGI|TC71473 homologue to UniRef100_A7PG35 Cluster: Chromosome chr6 scaffold_15,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_15, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 572
Score = 440 bits (222), Expect = e-122
Identities = 225/226 (99%)
Strand = Plus / Plus
Query: 2724 tgtgtatgcgtgggcgaaaggttcgaagttttatgagatcatggaaattacacaggtctt 2783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtgtatgcgtgggcgaaaggttcgaagttttatgagatcatggaaattacacaggtctt 60
Query: 2784 tgaaggcagcttgattagagcaattagaagacttgaggaagttcttcagcagttaataga 2843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgaaggcagcttgattagagcaattagaagacttgaggaagttcttcagcagttaataga 120
Query: 2844 agcagccaagtcaattggagagactcaacttgagacaaagtttgaagaggctgtgtccaa 2903
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agcagccaagtccattggagagactcaacttgagacaaagtttgaagaggctgtgtccaa 180
Query: 2904 gatcaagagggatattgtcttcgcagcatccttgtatttgtaactt 2949
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gatcaagagggatattgtcttcgcagcatccttgtatttgtaactt 226
>gnl|LJGI|BP067004 weakly similar to UniRef100_A7PG35 Cluster: Chromosome chr6
scaffold_15, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_15, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (4%)
Length = 422
Score = 392 bits (198), Expect = e-108
Identities = 236/252 (93%), Gaps = 15/252 (5%)
Strand = Plus / Plus
Query: 1 atggggtcactcaagaggaaatcaccagaagaaccaacaacacagttacagaggggggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 atggggtcactcaagaggaaatcaccagaagaaccaacaacacagttacagaggggggag 230
Query: 61 gaactgcaatatgactgtgtacatgacgtctcctacccacacggttacattcatcctcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 gaactgcaatatgactgtgtacatgacgtctcctacccacacggttacattcatcctcct 290
Query: 121 cctc---------------cttcttcttcttcttcaactcacactgagcctgctaagaag 165
|||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 cctccttcttcttcttcttcttcttcttcttcttcaactcacactgagcctgctaagaag 350
Query: 166 ttcccttttaccctcgacccctttcagtctcaagctattacctgcatcgaaaacggcgaa 225
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 351 ttcccttttaccctcgacccctttcagtcccaagctattacctgcatcgaaaacggcgaa 410
Query: 226 tccgtcatggtg 237
||||||||||||
Sbjct: 411 tccgtcatggtg 422