Miyakogusa Predicted Gene
- Lj1g3v3329000.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3329000.1 Non Chatacterized Hit- tr|Q2JNV7|Q2JNV7_SYNJB
Putative membrane protein OS=Synechococcus sp.
(strain,32.54,1e-16,UNCHARACTERIZED,NULL; SNARE_assoc,SNARE associated
Golgi protein; seg,NULL,CUFF.30361.1
(720 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77046 similar to UniRef100_A7QTB0 Cluster: Chromosome... 1289 0.0
gnl|LJGI|TC67112 similar to UniRef100_A7QTB0 Cluster: Chromosome... 795 0.0
>gnl|LJGI|TC77046 similar to UniRef100_A7QTB0 Cluster: Chromosome chr1 scaffold_166,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_166, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (72%)
Length = 699
Score = 1289 bits (650), Expect = 0.0
Identities = 650/650 (100%)
Strand = Plus / Plus
Query: 1 atggggcggtggtggctgaaggttgcggtggtggtggcgatagtggcggcgttatggaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 atggggcggtggtggctgaaggttgcggtggtggtggcgatagtggcggcgttatggaga 109
Query: 61 acctggaattcgaacggatcatgggataaggaagcagcgctgaaatggatgagtgaatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 acctggaattcgaacggatcatgggataaggaagcagcgctgaaatggatgagtgaatgg 169
Query: 121 tcagagagattgggggtttgggcaattcctctcttcatctccctccacactctctccatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 tcagagagattgggggtttgggcaattcctctcttcatctccctccacactctctccatc 229
Query: 181 gctctctgtttgccttctgctatcttcctcgaaaccggcgcttccatcctcttcggcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 gctctctgtttgccttctgctatcttcctcgaaaccggcgcttccatcctcttcggcttc 289
Query: 241 ttcccttccgttctctgtgtcttctccgccaagatcctcgccgcctctctctccttctgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ttcccttccgttctctgtgtcttctccgccaagatcctcgccgcctctctctccttctgg 349
Query: 301 atcggcaggttagtgttccgaaattcgacctcagcaatggattgggctcgaagaaacaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 atcggcaggttagtgttccgaaattcgacctcagcaatggattgggctcgaagaaacaag 409
Query: 361 tattttattctcctttctaaaggagttgagcgagatgggtggaaatttgttcttcttgcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 tattttattctcctttctaaaggagttgagcgagatgggtggaaatttgttcttcttgcc 469
Query: 421 cgcttctcgccggttccgtcttatatcattaactataccttagctgctactgaagttggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 cgcttctcgccggttccgtcttatatcattaactataccttagctgctactgaagttggg 529
Query: 481 ttcgtcttggattttcttcttcccaccatcattggatgtgtccctatgatcttgcagaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 ttcgtcttggattttcttcttcccaccatcattggatgtgtccctatgatcttgcagaat 589
Query: 541 acatccattggaagccttgcaggtgctgcttatgctacagcctctggctctaagaaatct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 acatccattggaagccttgcaggtgctgcttatgctacagcctctggctctaagaaatct 649
Query: 601 caaatttggtcttacgtttttcctatggttggaattttatctagcatact 650
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 caaatttggtcttacgtttttcctatggttggaattttatctagcatact 699
>gnl|LJGI|TC67112 similar to UniRef100_A7QTB0 Cluster: Chromosome chr1 scaffold_166,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_166, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (44%)
Length = 638
Score = 795 bits (401), Expect = 0.0
Identities = 401/401 (100%)
Strand = Plus / Plus
Query: 320 gaaattcgacctcagcaatggattgggctcgaagaaacaagtattttattctcctttcta 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 gaaattcgacctcagcaatggattgggctcgaagaaacaagtattttattctcctttcta 142
Query: 380 aaggagttgagcgagatgggtggaaatttgttcttcttgcccgcttctcgccggttccgt 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 aaggagttgagcgagatgggtggaaatttgttcttcttgcccgcttctcgccggttccgt 202
Query: 440 cttatatcattaactataccttagctgctactgaagttgggttcgtcttggattttcttc 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 cttatatcattaactataccttagctgctactgaagttgggttcgtcttggattttcttc 262
Query: 500 ttcccaccatcattggatgtgtccctatgatcttgcagaatacatccattggaagccttg 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ttcccaccatcattggatgtgtccctatgatcttgcagaatacatccattggaagccttg 322
Query: 560 caggtgctgcttatgctacagcctctggctctaagaaatctcaaatttggtcttacgttt 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 caggtgctgcttatgctacagcctctggctctaagaaatctcaaatttggtcttacgttt 382
Query: 620 ttcctatggttggaattttatctagcatacttatttctttgaggattaaaaagtattcaa 679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ttcctatggttggaattttatctagcatacttatttctttgaggattaaaaagtattcaa 442
Query: 680 cccaagtttcattagacaaaagtaacactgtagattagtga 720
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 cccaagtttcattagacaaaagtaacactgtagattagtga 483
Score = 137 bits (69), Expect = 1e-31
Identities = 72/73 (98%)
Strand = Plus / Plus
Query: 1 atggggcggtggtggctgaaggttgcggtggtggtggcgatagtggcggcgttatggaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19 atggggcggtggtggctgaaggttgcggtggtggtggcgatagtggcggcgttatggaga 78
Query: 61 acctggaattcga 73
||||| |||||||
Sbjct: 79 acctgaaattcga 91