Miyakogusa Predicted Gene

Lj1g3v3328960.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3328960.1 Non Chatacterized Hit- tr|A1CYG3|A1CYG3_NEOFI
Cu-dependent DNA-binding protein, putative
OS=Neosarto,33.7,1.9,seg,NULL,CUFF.30357.1
         (417 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC594668 weakly similar to UniRef100_A7QTM7 Cluster: Ch...   442   e-124
gnl|LJGI|TC59502 similar to UniRef100_A7QTM7 Cluster: Chromosome...   188   2e-47

>gnl|LJGI|DC594668 weakly similar to UniRef100_A7QTM7 Cluster: Chromosome chr11
           scaffold_170, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr11 scaffold_170, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (8%)
          Length = 547

 Score =  442 bits (223), Expect = e-124
 Identities = 226/227 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcttttaatctcatcttcagcttcttattcttcttctacatcatcaactggttccaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atggcttttaatctcatcttcagcttcttattcttcttctacatcatcaactggttccaa 380

                                                                       
Query: 61  acacagactttcagtctctgcccttcgattccctccacaacgccaaaggcctccgctcct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acacagactttcagtctctgcccttcgattccctccacaacgccaaaggcctccgctcct 440

                                                                       
Query: 121 tccttttgcgacccctttccgcccactccatctcccgagtcgccgcttccatcgaagcca 180
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tccttttgcgacccctttctgcccactccatctcccgagtcgccgcttccatcgaagcca 500

                                                          
Query: 181 agcttcaagtatggatcgaccgtgaagccacccaaacgctctcatgc 227
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agcttcaagtatggatcgaccgtgaagccacccaaacgctctcatgc 547


>gnl|LJGI|TC59502 similar to UniRef100_A7QTM7 Cluster: Chromosome chr11 scaffold_170,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_170, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (49%)
          Length = 1390

 Score =  188 bits (95), Expect = 2e-47
 Identities = 146/163 (89%)
 Strand = Plus / Plus

                                                                       
Query: 85  tcgattccctccacaacgccaaaggcctccgctccttccttttgcgacccctttccgccc 144
           |||| ||||||||||||||||||||| |||||||||||||   ||| ||||| |||||||
Sbjct: 267 tcgactccctccacaacgccaaaggcatccgctccttcctcacgcgccccctctccgccc 326

                                                                       
Query: 145 actccatctcccgagtcgccgcttccatcgaagccaagcttcaagtatggatcgaccgtg 204
           ||||||||||||| |||||||| |||||||||||| |||||||||  |||||||||||||
Sbjct: 327 actccatctcccgcgtcgccgcctccatcgaagccgagcttcaagcctggatcgaccgtg 386

                                                      
Query: 205 aagccacccaaacgctctcatgctccctcaacaacaaccacga 247
           || |||| |||||||||||  ||||||||| ||||||||||||
Sbjct: 387 aaaccactcaaacgctctcccgctccctcaccaacaaccacga 429