Miyakogusa Predicted Gene
- Lj1g3v3328940.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3328940.1 Non Chatacterized Hit- tr|I1KZJ9|I1KZJ9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.16782
PE,79.1,0,TRNASYNTHGLY,Glycyl-tRNA synthetase, alpha2 dimer; Class II
aaRS and biotin synthetases,NULL; Class ,CUFF.30355.1
(2172 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58583 similar to UniRef100_O23627 Cluster: Glycyl-tRN... 1929 0.0
gnl|LJGI|TC64239 similar to UniRef100_O23627 Cluster: Glycyl-tRN... 1437 0.0
gnl|LJGI|TC73747 similar to UniRef100_O23627 Cluster: Glycyl-tRN... 1189 0.0
gnl|LJGI|AV426034 homologue to UniRef100_A7PHS0 Cluster: Chromos... 620 e-177
>gnl|LJGI|TC58583 similar to UniRef100_O23627 Cluster: Glycyl-tRNA synthetase 1,
mitochondrial precursor; n=3; Arabidopsis thaliana|Rep:
Glycyl-tRNA synthetase 1, mitochondrial precursor -
Arabidopsis thaliana (Mouse-ear cress), partial (40%)
Length = 1034
Score = 1929 bits (973), Expect = 0.0
Identities = 1008/1016 (99%), Gaps = 4/1016 (0%)
Strand = Plus / Plus
Query: 29 gaaccatagccagaaattcccaatctcctttttcatctctttcaatttcactttcttcat 88
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gaaccatagccagaaattcccaatctcctttttcatctctttcaatttcactttcttcat 62
Query: 89 cttctcccatggccgccgccgccgcatcctccgaagattcgctccgcaaagccctcgccg 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 cttctcccatggccgccgccgccgcatcctccgaagattcgctccgcaaagccctcgccg 122
Query: 149 acaagcaatctgccgtcgacgcccagggcaacgccgttcgcgctctcaaggccgcatccg 208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 acaagcaatctgccgtcgacgcccagggcaacgccgttcgcgctctcaaggccgcatccg 182
Query: 209 ccgccaagcccgacatcgacgccgccatcgcagctctcaacgctctcaagctcgagaagt 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ccgccaagcccgacatcgacgccgccatcgcagctctcaacgctctcaagctcgagaagt 242
Query: 269 cctccatcgaacgctccctccagtctatcctctctgttgccgacacccgagaaagcttcc 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 cctccatcgaacgctccctccagtctatcctctctgttgccgacacccgagaaagcttcc 302
Query: 329 gccatgctgtgaccaataccctcgaacgccgcttcttctacatccccactgccaaaatct 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gccatgctgtgaccaataccctcgaacgccgcttcttctacatccccactgccaaaatct 362
Query: 389 acggcggcgttgctggtctgtacgactacggtcctcctggttgcgatgtcaagctcaacg 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 acggcggcgttgctggtctgtacgactacggtcctcctggttgcgatgtcaagctcaacg 422
Query: 449 tcctctccttctggcgtaagcatttcgttagggaggagcaaatgttggagatggactgtc 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 tcctctccttctggcgtaagcatttcgttagggaggagcaaatgttggagatggactgtc 482
Query: 509 cctgcgtgacgccagaggaagtgctgaaggcgtccggccatgttgagaagttcactgatc 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 cctgcgtgacgccagaggaagtgctgaaggcgtccggccatgttgagaagttcactgatc 542
Query: 569 tcatggtgaaggacaccaagactaacaattgcttccgtgccgatcacttgctcaaggact 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 tcatggtgaaggacaccaagactaacaattgcttccgtgccgatcacttgctcaaggact 602
Query: 629 attgtaatgaaaagctccagaaggaccttacattgtctcctgaaaaggtcgcggagctca 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 attgtaatgaaaagctccagaaggaccttacattgtctcctgaaaaggtcgcggagctca 662
Query: 689 agaatgtgctggccttgttggatgatttctctcctgaagagctcggcgctaagattaagg 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 agaatgtgctggccttgttggatgatttctctcctgaagagctcggcgctaagattaagg 722
Query: 749 agtatgggatcactgcccctgacacccagaatcccctctctgatccttaccctttcaatt 808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 agtatgggatcactgcccctgacacccagaatcccctctctgatccttaccctttcaatt 782
Query: 809 tgatgttccaaactaaaattggtccttctggcttgcagactgggtatttgcgtcctgaaa 868
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 tgatgttccaaactcaaattggtccttctggcttgcagactgggtatttgcgtcctgaaa 842
Query: 869 ctgcacagggcatatttgtcaacttcagggacttgtattattgcaatggaaacaagctac 928
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 843 ctgcacagggcatatttgtcaacttcagggacttgtattattgcaatggaaac-agctac 901
Query: 929 cttttgctgctgcccaagttgggcaagcttttagaaatgagattgctcctcgtcaaggcc 988
||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct: 902 cttttgctgctgcccaagttgggcaagctcttagaaatgagattgctcctcgtc-aggcc 960
Query: 989 ttctcagagttcgagaattcacactggcagaaattgagcactttgttgatccagaa 1044
|||||||||||||||||||||||||||||| | |||||||||| |||||||||||
Sbjct: 961 ttctcagagttcgagaattcacactggcagca--tgagcactttcttgatccagaa 1014
>gnl|LJGI|TC64239 similar to UniRef100_O23627 Cluster: Glycyl-tRNA synthetase 1,
mitochondrial precursor; n=3; Arabidopsis thaliana|Rep:
Glycyl-tRNA synthetase 1, mitochondrial precursor -
Arabidopsis thaliana (Mouse-ear cress), partial (27%)
Length = 784
Score = 1437 bits (725), Expect = 0.0
Identities = 725/725 (100%)
Strand = Plus / Plus
Query: 1 atgcttcttcaccaatttttcaaactcagaaccatagccagaaattcccaatctcctttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 atgcttcttcaccaatttttcaaactcagaaccatagccagaaattcccaatctcctttt 119
Query: 61 tcatctctttcaatttcactttcttcatcttctcccatggccgccgccgccgcatcctcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 tcatctctttcaatttcactttcttcatcttctcccatggccgccgccgccgcatcctcc 179
Query: 121 gaagattcgctccgcaaagccctcgccgacaagcaatctgccgtcgacgcccagggcaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 gaagattcgctccgcaaagccctcgccgacaagcaatctgccgtcgacgcccagggcaac 239
Query: 181 gccgttcgcgctctcaaggccgcatccgccgccaagcccgacatcgacgccgccatcgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gccgttcgcgctctcaaggccgcatccgccgccaagcccgacatcgacgccgccatcgca 299
Query: 241 gctctcaacgctctcaagctcgagaagtcctccatcgaacgctccctccagtctatcctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gctctcaacgctctcaagctcgagaagtcctccatcgaacgctccctccagtctatcctc 359
Query: 301 tctgttgccgacacccgagaaagcttccgccatgctgtgaccaataccctcgaacgccgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tctgttgccgacacccgagaaagcttccgccatgctgtgaccaataccctcgaacgccgc 419
Query: 361 ttcttctacatccccactgccaaaatctacggcggcgttgctggtctgtacgactacggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ttcttctacatccccactgccaaaatctacggcggcgttgctggtctgtacgactacggt 479
Query: 421 cctcctggttgcgatgtcaagctcaacgtcctctccttctggcgtaagcatttcgttagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 cctcctggttgcgatgtcaagctcaacgtcctctccttctggcgtaagcatttcgttagg 539
Query: 481 gaggagcaaatgttggagatggactgtccctgcgtgacgccagaggaagtgctgaaggcg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gaggagcaaatgttggagatggactgtccctgcgtgacgccagaggaagtgctgaaggcg 599
Query: 541 tccggccatgttgagaagttcactgatctcatggtgaaggacaccaagactaacaattgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 tccggccatgttgagaagttcactgatctcatggtgaaggacaccaagactaacaattgc 659
Query: 601 ttccgtgccgatcacttgctcaaggactattgtaatgaaaagctccagaaggaccttaca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 ttccgtgccgatcacttgctcaaggactattgtaatgaaaagctccagaaggaccttaca 719
Query: 661 ttgtctcctgaaaaggtcgcggagctcaagaatgtgctggccttgttggatgatttctct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 ttgtctcctgaaaaggtcgcggagctcaagaatgtgctggccttgttggatgatttctct 779
Query: 721 cctga 725
|||||
Sbjct: 780 cctga 784
>gnl|LJGI|TC73747 similar to UniRef100_O23627 Cluster: Glycyl-tRNA synthetase 1,
mitochondrial precursor; n=3; Arabidopsis thaliana|Rep:
Glycyl-tRNA synthetase 1, mitochondrial precursor -
Arabidopsis thaliana (Mouse-ear cress), partial (27%)
Length = 745
Score = 1189 bits (600), Expect = 0.0
Identities = 600/600 (100%)
Strand = Plus / Plus
Query: 1573 gaatcaaaaggggaggtggagtttgaagtgtgtcagcttaagaaaactgtgaccattaat 1632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaatcaaaaggggaggtggagtttgaagtgtgtcagcttaagaaaactgtgaccattaat 60
Query: 1633 aagaaaatggtgacgattcaaaaggagaaaaagatagagcatcagcgagtttttacacca 1692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagaaaatggtgacgattcaaaaggagaaaaagatagagcatcagcgagtttttacacca 120
Query: 1693 tctgtgattgaaccatcctttggcattggaaggataatttattgcctctatgagcacagt 1752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tctgtgattgaaccatcctttggcattggaaggataatttattgcctctatgagcacagt 180
Query: 1753 ttctacatgagaccaagtaaagctggagatgaagagttacgtgtatttcgcttccctgca 1812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttctacatgagaccaagtaaagctggagatgaagagttacgtgtatttcgcttccctgca 240
Query: 1813 ctagtagctcctattaagtgcacagtgttccctctggttcagaatcagacatttgaagca 1872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctagtagctcctattaagtgcacagtgttccctctggttcagaatcagacatttgaagca 300
Query: 1873 gtttctaaactcatttccaagtcattgaccgcagctgatgtttcacataaggttgacatt 1932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtttctaaactcatttccaagtcattgaccgcagctgatgtttcacataaggttgacatt 360
Query: 1933 acaggtacatctattggaaaacgatacgcaagaacagatgaacttggtgtgccctttgct 1992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acaggtacatctattggaaaacgatacgcaagaacagatgaacttggtgtgccctttgct 420
Query: 1993 atcactgtggattcagaatcatcagtgactattcgagagagggacagcaaggatcaagtg 2052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atcactgtggattcagaatcatcagtgactattcgagagagggacagcaaggatcaagtg 480
Query: 2053 cgtgttgatgtggaaaaagctgcctctgttgtcaaggagttaactgagggtcagagcaca 2112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgtgttgatgtggaaaaagctgcctctgttgtcaaggagttaactgagggtcagagcaca 540
Query: 2113 tgggcagatgtgtggtcaaattttccccaccattcctctgcagctgcagaagattgaatt 2172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgggcagatgtgtggtcaaattttccccaccattcctctgcagctgcagaagattgaatt 600
>gnl|LJGI|AV426034 homologue to UniRef100_A7PHS0 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 317
Score = 620 bits (313), Expect = e-177
Identities = 316/317 (99%)
Strand = Plus / Plus
Query: 975 tcctcgtcaaggccttctcagagttcgagaattcacactggcagaaattgagcactttgt 1034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcctcgtcaaggccttctcagagttcgagaattcacactggcagaaattgagcactttgt 60
Query: 1035 tgatccagaagacaagtcccatccaaagttcgcagaagttgctgacttggagtttttaat 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgatccagaagacaagtcccatccaaagttcgcagaagttgctgacttggagtttttaat 120
Query: 1095 gttcccaagggaggaacaagtgtctggtcagtctgcaaagcgaattcgtttgggtgaagc 1154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gttcccaagggaggaacaagtgtctggtcagtctgcaaagcgaattcgtttgggtgaagc 180
Query: 1155 tgtttccaagggtattgtcaataatgagactcttggttatttcatcgggagagtatatct 1214
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 181 tgtttccaagggtattgtcaataatgagactctcggttatttcatcgggagagtatatct 240
Query: 1215 tttcttgacgcgtcttggtattgacaaagaccgcttaagatttaggcaacatcttgccaa 1274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tttcttgacgcgtcttggtattgacaaagaccgcttaagatttaggcaacatcttgccaa 300
Query: 1275 tgagatggcccattatg 1291
|||||||||||||||||
Sbjct: 301 tgagatggcccattatg 317