Miyakogusa Predicted Gene
- Lj1g3v3328900.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3328900.1 tr|G7JIS3|G7JIS3_MEDTR Zinc finger protein ZPR1
(Fragment) OS=Medicago truncatula GN=MTR_4g083780
PE,33.17,2e-18,zf-ZPR1,Zinc finger, ZPR1-type; seg,NULL; Duplicated
domain in the epidermal growth fa,Zinc finger, ,CUFF.30377.1
(1497 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62719 similar to UniRef100_Q84W10 Cluster: At5g22480;... 1509 0.0
gnl|LJGI|TC61179 similar to UniRef100_A7P2R8 Cluster: Chromosome... 811 0.0
gnl|LJGI|AV409356 similar to UniRef100_A7P2R8 Cluster: Chromosom... 607 e-173
gnl|LJGI|GO036182 similar to UniRef100_Q84W10 Cluster: At5g22480... 379 e-104
gnl|LJGI|CB828606 similar to UniRef100_A7P2R8 Cluster: Chromosom... 377 e-103
gnl|LJGI|FS323632 similar to UniRef100_A7P2R8 Cluster: Chromosom... 272 6e-72
gnl|LJGI|BP042123 125 9e-28
gnl|LJGI|AV769518 90 5e-17
>gnl|LJGI|TC62719 similar to UniRef100_Q84W10 Cluster: At5g22480; n=1; Arabidopsis
thaliana|Rep: At5g22480 - Arabidopsis thaliana (Mouse-ear
cress), partial (50%)
Length = 1103
Score = 1509 bits (761), Expect = 0.0
Identities = 790/804 (98%)
Strand = Plus / Plus
Query: 692 gcgaagcaccagaaggagtagaagctgtggctggtaatcaaatgatgagagaaccacatg 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcgaagcaccagaaggagtagaagctgtggctggtaatcaaatgatgagagaaccacatg 60
Query: 752 ggtcagtgggggcagcagctggtcatcgagccattgcacaaagtaatagtgcagatatag 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggtcagtgggggcagcagctggtcatcgagccattgcacaaagtaatagtgcagatatag 120
Query: 812 cagaagcattatttcgctatactgcaccagaagaggtgatgactttcccatctacctgtg 871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cagaagcattatttcgctatactgcaccagaagaggtgatgactttcccatctacctgtg 180
Query: 872 gtacctgtgccagtagttgcgagactcgaatgttcgtcaccaatattccatacttccaag 931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtacctgtgccagtagttgcgagactcgaatgttcgtcaccaatattccatacttccaag 240
Query: 932 aagtaattgtaatggcatccacatgcgatgcttgtggttaccgcaactctgagttgaaac 991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aagtaattgtaatggcatccacatgcgatgcttgtggttaccgcaactctgagttgaaac 300
Query: 992 ctggtggccgaattcctgnnnnnnnnnnnnngattactctctatgtgaaaaatgttaatg 1051
|||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 301 ctggtggccgaattcctgaaaaaggaaaaaagattactctctatgtgaaaaatgttaatg 360
Query: 1052 acctgagccgagatgtaataaagtctgatacagcaagtgtaaaaattcctgaacttgagt 1111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acctgagccgagatgtaataaagtctgatacagcaagtgtaaaaattcctgaacttgagt 420
Query: 1112 tggagctggcaagtggcaccctgggaggacttgtcacaactgttgaaggtttaatttcaa 1171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tggagctggcaagtggcaccctgggaggacttgtcacaactgttgaaggtttaatttcaa 480
Query: 1172 aaattagtgaaagccttgagagggtccatgggtttacttttggagatagccttgatcaag 1231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaattagtgaaagccttgagagggtccatgggtttacttttggagatagccttgatcaag 540
Query: 1232 atagaaaaagcaaatggatagacttcaaagcaaggctagacaagcttcttagcttggaag 1291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atagaaaaagcaaatggatagacttcaaagcaaggctagacaagcttcttagcttggaag 600
Query: 1292 aagcatggactctagttcttgatgatgcattagccaattcttttatagcacctgcaactg 1351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aagcatggactctagttcttgatgatgcattagccaattcttttatagcacctgcaactg 660
Query: 1352 atgatctaaaagacgacaatcaattaacatttgaggaatatgagaggtcgtgggagcaaa 1411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 atgatctaaaagacgacaatcaattaacatttgaggaatatgagaggtcgtgggagcaaa 720
Query: 1412 atgaagaattgggtctgaatgatattgacacatccagtgctgatgctgcttatgaatcaa 1471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 atgaagaattgggtctgaatgatattgacacatccagtgctgatgctgcttatgaatcaa 780
Query: 1472 caaatactactaaaagtgagtgag 1495
||||||||||||||| ||||||||
Sbjct: 781 caaatactactaaaaatgagtgag 804
>gnl|LJGI|TC61179 similar to UniRef100_A7P2R8 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (63%)
Length = 762
Score = 811 bits (409), Expect = 0.0
Identities = 430/437 (98%)
Strand = Plus / Plus
Query: 1 atggaaggaaacaaagagcagattgtggatgttggatcggtggttgaatccgtttctgct 60
|||||||| | |||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 326 atggaagggagcaaagaccagattgtggatgtgggatcggtggttgaatccgtttctgct 385
Query: 61 gaagatggtgacgcccctctttaccaactcgaaagcctctgcatgcgttgtcatcaaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gaagatggtgacgcccctctttaccaactcgaaagcctctgcatgcgttgtcatcaaaat 445
Query: 121 gggactacaagacttctattgactataattccaaatttcagaaagattttgttgtcggct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gggactacaagacttctattgactataattccaaatttcagaaagattttgttgtcggct 505
Query: 181 ttcgattgtcctcattgtggtgaaaggaacaatgaagttcagtttgctggcgaaattcaa 240
|| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 506 tttgattgtcctcattgtggtgagaggaacaatgaagttcagtttgctggcgaaattcaa 565
Query: 241 ccgcgtggttgttgttactctttggagatcccatcaggcaaacagaagatgctcaaccgg 300
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 566 ccgcgtggttgttgttactctttggagatcccatcaggcaaacataagatgctcaaccgg 625
Query: 301 caagtggtaaaatcagaatctgcgaccattaagatacctgaattggaatttgagatacca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 caagtggtaaaatcagaatctgcgaccattaagatacctgaattggaatttgagatacca 685
Query: 361 ccagaggctcaacgtggtagtctgtcaacggtggagggggtactaacgcgagctgctgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 ccagaggctcaacgtggtagtctgtcaacggtggagggggtactaacgcgagctgctgat 745
Query: 421 ggacttcaggcccttca 437
|||||||||||||||||
Sbjct: 746 ggacttcaggcccttca 762
>gnl|LJGI|AV409356 similar to UniRef100_A7P2R8 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (45%)
Length = 410
Score = 607 bits (306), Expect = e-173
Identities = 306/306 (100%)
Strand = Plus / Plus
Query: 1 atggaaggaaacaaagagcagattgtggatgttggatcggtggttgaatccgtttctgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 atggaaggaaacaaagagcagattgtggatgttggatcggtggttgaatccgtttctgct 164
Query: 61 gaagatggtgacgcccctctttaccaactcgaaagcctctgcatgcgttgtcatcaaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 gaagatggtgacgcccctctttaccaactcgaaagcctctgcatgcgttgtcatcaaaat 224
Query: 121 gggactacaagacttctattgactataattccaaatttcagaaagattttgttgtcggct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 gggactacaagacttctattgactataattccaaatttcagaaagattttgttgtcggct 284
Query: 181 ttcgattgtcctcattgtggtgaaaggaacaatgaagttcagtttgctggcgaaattcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ttcgattgtcctcattgtggtgaaaggaacaatgaagttcagtttgctggcgaaattcaa 344
Query: 241 ccgcgtggttgttgttactctttggagatcccatcaggcaaacagaagatgctcaaccgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 ccgcgtggttgttgttactctttggagatcccatcaggcaaacagaagatgctcaaccgg 404
Query: 301 caagtg 306
||||||
Sbjct: 405 caagtg 410
>gnl|LJGI|GO036182 similar to UniRef100_Q84W10 Cluster: At5g22480; n=1; Arabidopsis
thaliana|Rep: At5g22480 - Arabidopsis thaliana (Mouse-ear
cress), partial (14%)
Length = 484
Score = 379 bits (191), Expect = e-104
Identities = 206/211 (97%)
Strand = Plus / Plus
Query: 1276 cttcttagcttggaagaagcatggactctagttcttgatgatgcattagccaattctttt 1335
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 59 cttcttagcttggaagaagcatggactctagtttttgatgatgcattagccaattctttt 118
Query: 1336 atagcacctgcaactgatgatctaaaagacgacaatcaattaacatttgaggaatatgag 1395
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 gtagcacctgcaactgatgatctaaaagacgacaatcaattaacatttgaggaatatgag 178
Query: 1396 aggtcgtgggagcaaaatgaagaattgggtctgaatgatattgacacatccagtgctgat 1455
||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 179 aggtcctgggagcaaaatgaagatttgggtctgaatgatattgacacatccagtgctgat 238
Query: 1456 gctgcttatgaatcaacaaatactactaaaa 1486
|| ||||||||||||||||||||||||||||
Sbjct: 239 gcagcttatgaatcaacaaatactactaaaa 269
>gnl|LJGI|CB828606 similar to UniRef100_A7P2R8 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 285
Score = 377 bits (190), Expect = e-103
Identities = 202/206 (98%)
Strand = Plus / Plus
Query: 13 aaagagcagattgtggatgttggatcggtggttgaatccgtttctgctgaagatggtgac 72
||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 80 aaagaccagattgtggatgtgggatcggtggttgaatccgtttctgctgaagatggtgac 139
Query: 73 gcccctctttaccaactcgaaagcctctgcatgcgttgtcatcaaaatgggactacaaga 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 gcccctctttaccaactcgaaagcctctgcatgcgttgtcatcaaaatgggactacaaga 199
Query: 133 cttctattgactataattccaaatttcagaaagattttgttgtcggctttcgattgtcct 192
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 200 cttctattgactataattccaaatttcagaaagattttgttgtcggcttttgattgtcct 259
Query: 193 cattgtggtgaaaggaacaatgaagt 218
||||||||||| ||||||||||||||
Sbjct: 260 cattgtggtgagaggaacaatgaagt 285
>gnl|LJGI|FS323632 similar to UniRef100_A7P2R8 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 641
Score = 272 bits (137), Expect = 6e-72
Identities = 146/149 (97%)
Strand = Plus / Plus
Query: 166 attttgttgtcggctttcgattgtcctcattgtggtgaaaggaacaatgaagttcagttt 225
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 493 attttgttgtcggcttttgattgtcctcattgtggtgagaggaacaatgaagttcagttt 552
Query: 226 gctggcgaaattcaaccgcgtggttgttgttactctttggagatcccatcaggcaaacag 285
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gctggcgaaattcaaccgcgtggttgttgttactctttggagatcccatcaggcaaacat 612
Query: 286 aagatgctcaaccggcaagtggtaaaatc 314
|||||||||||||||||||||||||||||
Sbjct: 613 aagatgctcaaccggcaagtggtaaaatc 641
Score = 198 bits (100), Expect = 7e-50
Identities = 115/120 (95%)
Strand = Plus / Plus
Query: 1 atggaaggaaacaaagagcagattgtggatgttggatcggtggttgaatccgtttctgct 60
|||||||| | |||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 373 atggaagggagcaaagaccagattgtggatgtgggatcggtggttgaatccgtttctgct 432
Query: 61 gaagatggtgacgcccctctttaccaactcgaaagcctctgcatgcgttgtcatcaaaat 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gaaaatggtgacgcccctctttaccaactcgaaagcctctgcatgcgttgtcatcaaaat 492
>gnl|LJGI|BP042123
Length = 455
Score = 125 bits (63), Expect = 9e-28
Identities = 63/63 (100%)
Strand = Plus / Minus
Query: 517 ggagaatcatccttcacatttattgttgatgatcctgcgggaaacagcttcattgaaaac 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ggagaatcatccttcacatttattgttgatgatcctgcgggaaacagcttcattgaaaac 396
Query: 577 ccg 579
|||
Sbjct: 395 ccg 393
>gnl|LJGI|AV769518
Length = 346
Score = 89.7 bits (45), Expect = 5e-17
Identities = 48/49 (97%)
Strand = Plus / Minus
Query: 1449 tgctgatgctgcttatgaatcaacaaatactactaaaagtgagtgagct 1497
|||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 346 tgctgatgctgcttatgattcaacaaatactactaaaagtgagtgagct 298