Miyakogusa Predicted Gene
- Lj1g3v3328730.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3328730.1 tr|D7DVX0|D7DVX0_NOSA0 Probable 30S ribosomal
protein PSRP-3 OS=Nostoc azollae (strain 0708)
GN=Aazo,53.16,2e-19,PSRP-3_Ycf65,Ribosomal protein PSRP-3/Ycf65;
RRP3_SPIOL_P82412;,Ribosomal protein PSRP-3/Ycf65; seg,,CUFF.30431.1
(528 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75039 homologue to UniRef100_A7PAP3 Cluster: Chromoso... 785 0.0
gnl|LJGI|TC60889 homologue to UniRef100_A7PAP3 Cluster: Chromoso... 785 0.0
gnl|LJGI|TC59929 homologue to UniRef100_A7PAP3 Cluster: Chromoso... 660 0.0
gnl|LJGI|TC80137 homologue to UniRef100_A7PAP3 Cluster: Chromoso... 490 e-138
gnl|LJGI|TC67947 homologue to UniRef100_A7PAP3 Cluster: Chromoso... 450 e-126
gnl|LJGI|BW594428 similar to UniRef100_A9V532 Cluster: Predicted... 210 6e-54
>gnl|LJGI|TC75039 homologue to UniRef100_A7PAP3 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (53%)
Length = 727
Score = 785 bits (396), Expect = 0.0
Identities = 396/396 (100%)
Strand = Plus / Plus
Query: 133 ctgtgtccctcaaacccctcacgttttaggctcgctgtttctgccgccgaaactccttct 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ctgtgtccctcaaacccctcacgttttaggctcgctgtttctgccgccgaaactccttct 322
Query: 193 gctgcggttgctgttgctgaacaagatgacacttctctctctcctccgcctcagaagctt 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gctgcggttgctgttgctgaacaagatgacacttctctctctcctccgcctcagaagctt 382
Query: 253 ggagtggttgtgaagccaactgacaagccaagacttgtgttgaagttcatttggatggag 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ggagtggttgtgaagccaactgacaagccaagacttgtgttgaagttcatttggatggag 442
Query: 313 aagaacattggcattgcacttgaccaagctgtaccgggccacggcaccatccctctcagc 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aagaacattggcattgcacttgaccaagctgtaccgggccacggcaccatccctctcagc 502
Query: 373 ccttattacttttggccgaggaaagatgcttgggaagagctgaaggagttgctcgagagc 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ccttattacttttggccgaggaaagatgcttgggaagagctgaaggagttgctcgagagc 562
Query: 433 aagccttggatatctcaaaagcagatgattattcttctcaatcaagctactgatatcatc 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 aagccttggatatctcaaaagcagatgattattcttctcaatcaagctactgatatcatc 622
Query: 493 aatttgtggcagcagagtggtggcaacttatcctga 528
||||||||||||||||||||||||||||||||||||
Sbjct: 623 aatttgtggcagcagagtggtggcaacttatcctga 658
Score = 95.6 bits (48), Expect = 3e-19
Identities = 48/48 (100%)
Strand = Plus / Plus
Query: 1 atgatgttatcatccatggtggcagttcaacctcatcccactctgaag 48
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 atgatgttatcatccatggtggcagttcaacctcatcccactctgaag 178
>gnl|LJGI|TC60889 homologue to UniRef100_A7PAP3 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (53%)
Length = 755
Score = 785 bits (396), Expect = 0.0
Identities = 396/396 (100%)
Strand = Plus / Plus
Query: 133 ctgtgtccctcaaacccctcacgttttaggctcgctgtttctgccgccgaaactccttct 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 ctgtgtccctcaaacccctcacgttttaggctcgctgtttctgccgccgaaactccttct 237
Query: 193 gctgcggttgctgttgctgaacaagatgacacttctctctctcctccgcctcagaagctt 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 gctgcggttgctgttgctgaacaagatgacacttctctctctcctccgcctcagaagctt 297
Query: 253 ggagtggttgtgaagccaactgacaagccaagacttgtgttgaagttcatttggatggag 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 ggagtggttgtgaagccaactgacaagccaagacttgtgttgaagttcatttggatggag 357
Query: 313 aagaacattggcattgcacttgaccaagctgtaccgggccacggcaccatccctctcagc 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 aagaacattggcattgcacttgaccaagctgtaccgggccacggcaccatccctctcagc 417
Query: 373 ccttattacttttggccgaggaaagatgcttgggaagagctgaaggagttgctcgagagc 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 ccttattacttttggccgaggaaagatgcttgggaagagctgaaggagttgctcgagagc 477
Query: 433 aagccttggatatctcaaaagcagatgattattcttctcaatcaagctactgatatcatc 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 aagccttggatatctcaaaagcagatgattattcttctcaatcaagctactgatatcatc 537
Query: 493 aatttgtggcagcagagtggtggcaacttatcctga 528
||||||||||||||||||||||||||||||||||||
Sbjct: 538 aatttgtggcagcagagtggtggcaacttatcctga 573
Score = 95.6 bits (48), Expect = 3e-19
Identities = 48/48 (100%)
Strand = Plus / Plus
Query: 1 atgatgttatcatccatggtggcagttcaacctcatcccactctgaag 48
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 atgatgttatcatccatggtggcagttcaacctcatcccactctgaag 93
>gnl|LJGI|TC59929 homologue to UniRef100_A7PAP3 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (51%)
Length = 750
Score = 660 bits (333), Expect = 0.0
Identities = 381/396 (96%), Gaps = 2/396 (0%)
Strand = Plus / Plus
Query: 133 ctgtgtccctcaaacccctcacgttttaggctcgctgtttctgccgccgaaactccttct 192
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 167 ctgtgtccctcaaacccctcacgttttaggctcgctgtttctgcggccgaaactccttct 226
Query: 193 gctgcggttgctgttgctgaacaagatgacacttctctctctcctccgcctcagaagctt 252
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 gctgcggttgccgttgctgaacaagatgacacttctctctctcctccgcctcagaagctt 286
Query: 253 ggagtggttgtgaagccaactgacaagccaagacttgtgttgaagttcatttggatggag 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 ggagtggttgtgaagccaactgacaagccaagacttgtgttgaagttcatttggatggag 346
Query: 313 aagaacattggcattgcacttgaccaagctgtaccgggccacggcaccatccctctcagc 372
||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 347 aagaacattggcattgcacttgaccaagctgtaccgggccacgacaccattcctctcagc 406
Query: 373 ccttattacttttggccgaggaaagatgcttgggaagagctgaaggagttgctcgagagc 432
||||||||||||||||| ||||||||||||||||| |||| |||||||| |||||||||
Sbjct: 407 ccttattacttttggccaaggaaagatgcttggga--agctcaaggagttactcgagagc 464
Query: 433 aagccttggatatctcaaaagcagatgattattcttctcaatcaagctactgatatcatc 492
|||||||||||||| ||||||||||||||||||||||| || ||||| |||||| |||||
Sbjct: 465 aagccttggatatcacaaaagcagatgattattcttctgaaccaagcaactgatctcatc 524
Query: 493 aatttgtggcagcagagtggtggcaacttatcctga 528
||||||||||||||||||||||||||||| ||||||
Sbjct: 525 aatttgtggcagcagagtggtggcaacttgtcctga 560
Score = 67.9 bits (34), Expect = 6e-11
Identities = 45/48 (93%), Gaps = 3/48 (6%)
Strand = Plus / Plus
Query: 1 atgatgttatcatccatggtggcagttcaacctcatcccactctgaag 48
|||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 50 atgatgttatcatccatggtggcagttcaacctc---ccactctgaag 94
>gnl|LJGI|TC80137 homologue to UniRef100_A7PAP3 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (53%)
Length = 523
Score = 490 bits (247), Expect = e-138
Identities = 277/287 (96%)
Strand = Plus / Plus
Query: 242 ctcagaagcttggagtggttgtgaagccaactgacaagccaagacttgtgttgaagttca 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39 ctcagaagcttggagtggttgtgaagccaactgacaagccaagacttgtgttgaagttca 98
Query: 302 tttggatggagaagaacattggcattgcacttgaccaagctgtaccgggccacggcacca 361
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 99 tttggatggagaagaacattggcattgcacttgaccaagctgtaccgggccacgacacca 158
Query: 362 tccctctcagcccttattacttttggccgaggaaagatgcttgggaagagctgaaggagt 421
| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 159 ttcctctcagcccttattacttttggccaaggaaagatgcttgggaagagctcaaggagt 218
Query: 422 tgctcgagagcaagccttggatatctcaaaagcagatgattattcttctcaatcaagcta 481
| ||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| |
Sbjct: 219 tactcgagagcaagccttggatatcacaaaagcagatgattattcttctgaaccaagcaa 278
Query: 482 ctgatatcatcaatttgtggcagcagagtggtggcaacttatcctga 528
|||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 279 ctgatatcatcaatttgtggcagcagagtggtggcaacttgtcctga 325
>gnl|LJGI|TC67947 homologue to UniRef100_A7PAP3 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (51%)
Length = 797
Score = 450 bits (227), Expect = e-126
Identities = 269/282 (95%), Gaps = 2/282 (0%)
Strand = Plus / Plus
Query: 247 aagcttggagtggttgtgaagccaactgacaagccaagacttgtgttgaagttcatttgg 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 aagcttggagtggttgtgaagccaactgacaagccaagacttgtgttgaagttcatttgg 152
Query: 307 atggagaagaacattggcattgcacttgaccaagctgtaccgggccacggcaccatccct 366
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 153 atggagaagaacattggcattgcacttgaccaagctgtaccgggccacgacaccattcct 212
Query: 367 ctcagcccttattacttttggccgaggaaagatgcttgggaagagctgaaggagttgctc 426
||||||||||||||||||||||| ||||||||||||||||| |||| |||||||| |||
Sbjct: 213 ctcagcccttattacttttggccaaggaaagatgcttggga--agctcaaggagttactc 270
Query: 427 gagagcaagccttggatatctcaaaagcagatgattattcttctcaatcaagctactgat 486
|||||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||||
Sbjct: 271 gagagcaagccttggatatcacaaaagcagatgattattcttctgaaccaagcaactgat 330
Query: 487 atcatcaatttgtggcagcagagtggtggcaacttatcctga 528
|||||||||||||||||||||||||||||||||| ||||||
Sbjct: 331 ctcatcaatttgtggcagcagagtggtggcaacttgtcctga 372
>gnl|LJGI|BW594428 similar to UniRef100_A9V532 Cluster: Predicted protein; n=1;
Monosiga brevicollis MX1|Rep: Predicted protein -
Monosiga brevicollis MX1, partial (12%)
Length = 482
Score = 210 bits (106), Expect = 6e-54
Identities = 112/114 (98%)
Strand = Plus / Plus
Query: 133 ctgtgtccctcaaacccctcacgttttaggctcgctgtttctgccgccgaaactccttct 192
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 241 ctgtgtccctcaaacccctcacgttttaggctcgctgtttctgcggccgaaactccttct 300
Query: 193 gctgcggttgctgttgctgaacaagatgacacttctctctctcctccgcctcag 246
||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gctgcggttgccgttgctgaacaagatgacacttctctctctcctccgcctcag 354
Score = 67.9 bits (34), Expect = 6e-11
Identities = 45/48 (93%), Gaps = 3/48 (6%)
Strand = Plus / Plus
Query: 1 atgatgttatcatccatggtggcagttcaacctcatcccactctgaag 48
|||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 124 atgatgttatcatccatggtggcagttcaacctc---ccactctgaag 168