Miyakogusa Predicted Gene
- Lj1g3v3328720.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3328720.1 tr|I0J3L1|I0J3L1_9EUGL Probable 30S ribosomal
protein PSRP-3 OS=Eutreptiella gymnastica GN=ycf65
PE=,56.58,2e-19,PSRP-3_Ycf65,Ribosomal protein PSRP-3/Ycf65;
RRP3_SPIOL_P82412;,Ribosomal protein PSRP-3/Ycf65,CUFF.30430.1
(300 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75039 homologue to UniRef100_A7PAP3 Cluster: Chromoso... 567 e-161
gnl|LJGI|TC60889 homologue to UniRef100_A7PAP3 Cluster: Chromoso... 567 e-161
gnl|LJGI|TC80137 homologue to UniRef100_A7PAP3 Cluster: Chromoso... 488 e-137
gnl|LJGI|TC59929 homologue to UniRef100_A7PAP3 Cluster: Chromoso... 458 e-129
gnl|LJGI|TC67947 homologue to UniRef100_A7PAP3 Cluster: Chromoso... 450 e-126
>gnl|LJGI|TC75039 homologue to UniRef100_A7PAP3 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (53%)
Length = 727
Score = 567 bits (286), Expect = e-161
Identities = 286/286 (100%)
Strand = Plus / Plus
Query: 15 tcagaagcttggagtggttgtgaagccaactgacaagccaagacttgtgttgaagttcat 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tcagaagcttggagtggttgtgaagccaactgacaagccaagacttgtgttgaagttcat 432
Query: 75 ttggatggagaagaacattggcattgcacttgaccaagctgtaccgggccacggcaccat 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ttggatggagaagaacattggcattgcacttgaccaagctgtaccgggccacggcaccat 492
Query: 135 ccctctcagcccttattacttttggccgaggaaagatgcttgggaagagctgaaggagtt 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ccctctcagcccttattacttttggccgaggaaagatgcttgggaagagctgaaggagtt 552
Query: 195 gctcgagagcaagccttggatatctcaaaagcagatgattattcttctcaatcaagctac 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gctcgagagcaagccttggatatctcaaaagcagatgattattcttctcaatcaagctac 612
Query: 255 tgatatcatcaatttgtggcagcagagtggtggcaacttatcctga 300
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tgatatcatcaatttgtggcagcagagtggtggcaacttatcctga 658
>gnl|LJGI|TC60889 homologue to UniRef100_A7PAP3 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (53%)
Length = 755
Score = 567 bits (286), Expect = e-161
Identities = 286/286 (100%)
Strand = Plus / Plus
Query: 15 tcagaagcttggagtggttgtgaagccaactgacaagccaagacttgtgttgaagttcat 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 tcagaagcttggagtggttgtgaagccaactgacaagccaagacttgtgttgaagttcat 347
Query: 75 ttggatggagaagaacattggcattgcacttgaccaagctgtaccgggccacggcaccat 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 ttggatggagaagaacattggcattgcacttgaccaagctgtaccgggccacggcaccat 407
Query: 135 ccctctcagcccttattacttttggccgaggaaagatgcttgggaagagctgaaggagtt 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 ccctctcagcccttattacttttggccgaggaaagatgcttgggaagagctgaaggagtt 467
Query: 195 gctcgagagcaagccttggatatctcaaaagcagatgattattcttctcaatcaagctac 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 gctcgagagcaagccttggatatctcaaaagcagatgattattcttctcaatcaagctac 527
Query: 255 tgatatcatcaatttgtggcagcagagtggtggcaacttatcctga 300
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 tgatatcatcaatttgtggcagcagagtggtggcaacttatcctga 573
>gnl|LJGI|TC80137 homologue to UniRef100_A7PAP3 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (53%)
Length = 523
Score = 488 bits (246), Expect = e-137
Identities = 276/286 (96%)
Strand = Plus / Plus
Query: 15 tcagaagcttggagtggttgtgaagccaactgacaagccaagacttgtgttgaagttcat 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40 tcagaagcttggagtggttgtgaagccaactgacaagccaagacttgtgttgaagttcat 99
Query: 75 ttggatggagaagaacattggcattgcacttgaccaagctgtaccgggccacggcaccat 134
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 100 ttggatggagaagaacattggcattgcacttgaccaagctgtaccgggccacgacaccat 159
Query: 135 ccctctcagcccttattacttttggccgaggaaagatgcttgggaagagctgaaggagtt 194
|||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 160 tcctctcagcccttattacttttggccaaggaaagatgcttgggaagagctcaaggagtt 219
Query: 195 gctcgagagcaagccttggatatctcaaaagcagatgattattcttctcaatcaagctac 254
||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| ||
Sbjct: 220 actcgagagcaagccttggatatcacaaaagcagatgattattcttctgaaccaagcaac 279
Query: 255 tgatatcatcaatttgtggcagcagagtggtggcaacttatcctga 300
||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 280 tgatatcatcaatttgtggcagcagagtggtggcaacttgtcctga 325
>gnl|LJGI|TC59929 homologue to UniRef100_A7PAP3 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (51%)
Length = 750
Score = 458 bits (231), Expect = e-129
Identities = 273/286 (95%), Gaps = 2/286 (0%)
Strand = Plus / Plus
Query: 15 tcagaagcttggagtggttgtgaagccaactgacaagccaagacttgtgttgaagttcat 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tcagaagcttggagtggttgtgaagccaactgacaagccaagacttgtgttgaagttcat 336
Query: 75 ttggatggagaagaacattggcattgcacttgaccaagctgtaccgggccacggcaccat 134
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 337 ttggatggagaagaacattggcattgcacttgaccaagctgtaccgggccacgacaccat 396
Query: 135 ccctctcagcccttattacttttggccgaggaaagatgcttgggaagagctgaaggagtt 194
|||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||
Sbjct: 397 tcctctcagcccttattacttttggccaaggaaagatgcttggga--agctcaaggagtt 454
Query: 195 gctcgagagcaagccttggatatctcaaaagcagatgattattcttctcaatcaagctac 254
||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| ||
Sbjct: 455 actcgagagcaagccttggatatcacaaaagcagatgattattcttctgaaccaagcaac 514
Query: 255 tgatatcatcaatttgtggcagcagagtggtggcaacttatcctga 300
|||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct: 515 tgatctcatcaatttgtggcagcagagtggtggcaacttgtcctga 560
>gnl|LJGI|TC67947 homologue to UniRef100_A7PAP3 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (51%)
Length = 797
Score = 450 bits (227), Expect = e-126
Identities = 269/282 (95%), Gaps = 2/282 (0%)
Strand = Plus / Plus
Query: 19 aagcttggagtggttgtgaagccaactgacaagccaagacttgtgttgaagttcatttgg 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 aagcttggagtggttgtgaagccaactgacaagccaagacttgtgttgaagttcatttgg 152
Query: 79 atggagaagaacattggcattgcacttgaccaagctgtaccgggccacggcaccatccct 138
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 153 atggagaagaacattggcattgcacttgaccaagctgtaccgggccacgacaccattcct 212
Query: 139 ctcagcccttattacttttggccgaggaaagatgcttgggaagagctgaaggagttgctc 198
||||||||||||||||||||||| ||||||||||||||||| |||| |||||||| |||
Sbjct: 213 ctcagcccttattacttttggccaaggaaagatgcttggga--agctcaaggagttactc 270
Query: 199 gagagcaagccttggatatctcaaaagcagatgattattcttctcaatcaagctactgat 258
|||||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||||
Sbjct: 271 gagagcaagccttggatatcacaaaagcagatgattattcttctgaaccaagcaactgat 330
Query: 259 atcatcaatttgtggcagcagagtggtggcaacttatcctga 300
|||||||||||||||||||||||||||||||||| ||||||
Sbjct: 331 ctcatcaatttgtggcagcagagtggtggcaacttgtcctga 372