Miyakogusa Predicted Gene
- Lj1g3v3318590.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3318590.1 tr|A2Q6E2|A2Q6E2_MEDTR Cryptochrome OS=Medicago
truncatula GN=MTR_5g063920 PE=4 SV=1,94.65,0,DNA_photolyase,DNA
photolyase, N-terminal; FAD_binding_7,DNA photolyase,
FAD-binding/Cryptochrome,
C,NODE_31858_length_1305_cov_194.942535.path2.1
(1095 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72840 homologue to UniRef100_A2Q6E2 Cluster: Deoxyrib... 1707 0.0
gnl|LJGI|TC79820 similar to UniRef100_A2Q6E2 Cluster: Deoxyribod... 692 0.0
gnl|LJGI|TC69438 similar to UniRef100_A2Q6E2 Cluster: Deoxyribod... 531 e-150
gnl|LJGI|TC64155 similar to UniRef100_A2Q6E2 Cluster: Deoxyribod... 498 e-140
>gnl|LJGI|TC72840 homologue to UniRef100_A2Q6E2 Cluster: Deoxyribodipyrimidine
photolyase, class 1; n=1; Medicago truncatula|Rep:
Deoxyribodipyrimidine photolyase, class 1 - Medicago
truncatula (Barrel medic), partial (43%)
Length = 1079
Score = 1707 bits (861), Expect = 0.0
Identities = 874/877 (99%), Gaps = 1/877 (0%)
Strand = Plus / Plus
Query: 1 atgtcaggtggaggagcatgcagcatagtttggttcaggagggatctgagggttgaggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 atgtcaggtggaggagcatgcagcatagtttggttcaggagggatctgagggttgaggat 262
Query: 61 aatccagcacttgcagcaggagtcagagcaggagctgtggttgctgttttcatctgggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aatccagcacttgcagcaggagtcagagcaggagctgtggttgctgttttcatctgggca 322
Query: 121 cctgaagaagagggtcagtactaccctggaagggtctcaaggtggtggctcaagaacagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cctgaagaagagggtcagtactaccctggaagggtctcaaggtggtggctcaagaacagt 382
Query: 181 ttggctacccttgattcttctttgagaagccttggcacccctcttataactaagagatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ttggctacccttgattcttctttgagaagccttggcacccctcttataactaagagatca 442
Query: 241 actgatagtgtttcttctttgttggaggttgttaagtccactggagccactcaaatcttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 actgatagtgtttcttctttgttggaggttgttaagtccactggagccactcaaatcttt 502
Query: 301 ttcaaccatttatatgatccattgtcactagttagggatcacagagcaaaggaggttctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ttcaaccatttatatgatccattgtcactagttagggatcacagagcaaaggaggttctg 562
Query: 361 actgctcaaggcatcaccgtacgttccttcaattcagatttattgtatgagccatgggat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 actgctcaaggcatcaccgtacgttccttcaattcagatttattgtatgagccatgggat 622
Query: 421 gtgaatgatgctaa-tggccaaccattcacaacttttgatgctttttgggaaagatgcct 479
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gtgaatgatgctaacttgccaaccattcacaacttttgatgctttttgggaaagatgcct 682
Query: 480 taccatgccttatgacccacaagcacctcttcttccacctaaaaggattattccaggtga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 taccatgccttatgacccacaagcacctcttcttccacctaaaaggattattccaggtga 742
Query: 540 tgcatcaaggtgcccttctgatacattggtgtttgaagatgaatcagagaaagcaagcaa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 tgcatcaaggtgcccttctgatacattggtgtttgaagatgaatcagagaaagcaagcaa 802
Query: 600 tgcgcttcttgctcgagcatggtcacccgggtggagcaatgcagacaaggctttgacagc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 tgcgcttcttgctcgagcatggtcacccgggtggagcaatgcagacaaggctttgacagc 862
Query: 660 atttataaacggtcccctaattgagtactcgaagaatcgcaggaaggctgacagtgccac 719
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 atttataaacggccccctaattgagtactcgaagaatcgcaggaaggctgacagtgccac 922
Query: 720 aacctcattcctctccccgcatttgcattttggcgaggtgagcgtcaagaaagttttcca 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 923 aacctcattcctctccccgcatttgcattttggcgaggtgagcgtcaagaaagttttcca 982
Query: 780 tcttgtccgaattaagcaagtcctttgggccaacgaaggaaacatagctggtgaagaaag 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 983 tcttgtccgaattaagcaagtcctttgggccaacgaaggaaacatagctggtgaagaaag 1042
Query: 840 tgtgaacttgtttctcaagtctattggccttagagag 876
|||||||||||||||||||||||||||||||||||||
Sbjct: 1043 tgtgaacttgtttctcaagtctattggccttagagag 1079
>gnl|LJGI|TC79820 similar to UniRef100_A2Q6E2 Cluster: Deoxyribodipyrimidine
photolyase, class 1; n=1; Medicago truncatula|Rep:
Deoxyribodipyrimidine photolyase, class 1 - Medicago
truncatula (Barrel medic), partial (39%)
Length = 873
Score = 692 bits (349), Expect = 0.0
Identities = 664/769 (86%)
Strand = Plus / Plus
Query: 20 gcagcatagtttggttcaggagggatctgagggttgaggataatccagcacttgcagcag 79
|||||||||| ||||||||||| ||||||||||| |||||||| || || | | || |
Sbjct: 93 gcagcatagtgtggttcaggagagatctgagggtggaggataacccggcgttgacggctg 152
Query: 80 gagtcagagcaggagctgtggttgctgttttcatctgggcacctgaagaagagggtcagt 139
||| |||||||| || || || || |||||| ||||||| || || ||||||||||| |
Sbjct: 153 cagtgagagcaggtgcggtagtggcggttttcgtctgggcgccggaggaagagggtcaat 212
Query: 140 actaccctggaagggtctcaaggtggtggctcaagaacagtttggctacccttgattctt 199
|| ||||||||||||| || ||||||||| | ||| | ||||| ||| ||||||||| |
Sbjct: 213 accaccctggaagggtttctaggtggtggttgaagcagagtttagctcaccttgattcct 272
Query: 200 ctttgagaagccttggcacccctcttataactaagagatcaactgatagtgtttcttctt 259
||||||||| ||||| || || ||||| ||||||||||| |||||||||||||||||||
Sbjct: 273 ctttgagaaatcttggtactccacttatcactaagagatccactgatagtgtttcttctt 332
Query: 260 tgttggaggttgttaagtccactggagccactcaaatctttttcaaccatttatatgatc 319
|||||||||||||| |||||||||| || ||||||||||| || ||||||||||||||||
Sbjct: 333 tgttggaggttgttgagtccactggtgctactcaaatcttctttaaccatttatatgatc 392
Query: 320 cattgtcactagttagggatcacagagcaaaggaggttctgactgctcaaggcatcaccg 379
| ||||||| | ||||||||| ||||||| |||||||||||| |||| ||||| || |
Sbjct: 393 ccctgtcacttatcagggatcaccgagcaaaagaggttctgacttctcagggcataacag 452
Query: 380 tacgttccttcaattcagatttattgtatgagccatgggatgtgaatgatgctaatggcc 439
|||||||||||||| | |||||||| ||||| ||||||||||| |||||||| |||||||
Sbjct: 453 tacgttccttcaatgctgatttattatatgaaccatgggatgtcaatgatgccaatggcc 512
Query: 440 aaccattcacaacttttgatgctttttgggaaagatgccttaccatgccttatgacccac 499
|||||||||||||||| ||||||||||||| |||||| |||| |||||||||||| ||
Sbjct: 513 aaccattcacaactttcgatgctttttggggaagatgtcttagcatgccttatgatcccg 572
Query: 500 aagcacctcttcttccacctaaaaggattattccaggtgatgcatcaaggtgcccttctg 559
| |||||||||| |||||||||||||||||||||||||||| ||||| |||| ||| ||
Sbjct: 573 agtcacctcttctcccacctaaaaggattattccaggtgatgtatcaaagtgctcttgtg 632
Query: 560 atacattggtgtttgaagatgaatcagagaaagcaagcaatgcgcttcttgctcgagcat 619
|| | ||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 633 atgcgttgatgtttgaagatgaatcagagaaggcaagcaatgcacttcttgctcgagcat 692
Query: 620 ggtcacccgggtggagcaatgcagacaaggctttgacagcatttataaacggtcccctaa 679
||||||| |||||||||||||| ||||||| ||||| |||| ||||| ||||| || |
Sbjct: 693 ggtcacctgggtggagcaatgctaacaaggcattgaccacattcataaatggtccactga 752
Query: 680 ttgagtactcgaagaatcgcaggaaggctgacagtgccacaacctcattcctctccccgc 739
|||||||||| | |||||||||||||| ||||||||||| || ||||| ||||| || |
Sbjct: 753 ttgagtactctcaaaatcgcaggaaggcagacagtgccactacatcatttctctcacccc 812
Query: 740 atttgcattttggcgaggtgagcgtcaagaaagttttccatcttgtccg 788
||||||||||||| |||||||| ||||| ||||| ||||||||||||||
Sbjct: 813 atttgcattttggtgaggtgagtgtcaaaaaagtcttccatcttgtccg 861
>gnl|LJGI|TC69438 similar to UniRef100_A2Q6E2 Cluster: Deoxyribodipyrimidine
photolyase, class 1; n=1; Medicago truncatula|Rep:
Deoxyribodipyrimidine photolyase, class 1 - Medicago
truncatula (Barrel medic), partial (29%)
Length = 972
Score = 531 bits (268), Expect = e-150
Identities = 268/268 (100%)
Strand = Plus / Plus
Query: 1 atgtcaggtggaggagcatgcagcatagtttggttcaggagggatctgagggttgaggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 atgtcaggtggaggagcatgcagcatagtttggttcaggagggatctgagggttgaggat 171
Query: 61 aatccagcacttgcagcaggagtcagagcaggagctgtggttgctgttttcatctgggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 aatccagcacttgcagcaggagtcagagcaggagctgtggttgctgttttcatctgggca 231
Query: 121 cctgaagaagagggtcagtactaccctggaagggtctcaaggtggtggctcaagaacagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 cctgaagaagagggtcagtactaccctggaagggtctcaaggtggtggctcaagaacagt 291
Query: 181 ttggctacccttgattcttctttgagaagccttggcacccctcttataactaagagatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 ttggctacccttgattcttctttgagaagccttggcacccctcttataactaagagatca 351
Query: 241 actgatagtgtttcttctttgttggagg 268
||||||||||||||||||||||||||||
Sbjct: 352 actgatagtgtttcttctttgttggagg 379
>gnl|LJGI|TC64155 similar to UniRef100_A2Q6E2 Cluster: Deoxyribodipyrimidine
photolyase, class 1; n=1; Medicago truncatula|Rep:
Deoxyribodipyrimidine photolyase, class 1 - Medicago
truncatula (Barrel medic), partial (35%)
Length = 808
Score = 498 bits (251), Expect = e-140
Identities = 491/571 (85%)
Strand = Plus / Plus
Query: 20 gcagcatagtttggttcaggagggatctgagggttgaggataatccagcacttgcagcag 79
|||||||||| ||||||||||| ||||||||||| |||||||| || || | | || |
Sbjct: 105 gcagcatagtgtggttcaggagagatctgagggtggaggataacccggcgttgacggctg 164
Query: 80 gagtcagagcaggagctgtggttgctgttttcatctgggcacctgaagaagagggtcagt 139
||| |||||||| || || || || |||||| ||||||| || || ||||||||||| |
Sbjct: 165 cagtgagagcaggtgcggtagtggcggttttcgtctgggcgccggaggaagagggtcaat 224
Query: 140 actaccctggaagggtctcaaggtggtggctcaagaacagtttggctacccttgattctt 199
|| ||||||||||||| || ||||||||| | ||| | ||||| ||| ||||||||| |
Sbjct: 225 accaccctggaagggtttctaggtggtggttgaagcagagtttagctcaccttgattcct 284
Query: 200 ctttgagaagccttggcacccctcttataactaagagatcaactgatagtgtttcttctt 259
||||||||| ||||| || || ||||| ||||||||||| |||||||||||||||||||
Sbjct: 285 ctttgagaaatcttggtactccacttatcactaagagatccactgatagtgtttcttctt 344
Query: 260 tgttggaggttgttaagtccactggagccactcaaatctttttcaaccatttatatgatc 319
|||||||||||||| |||||||||| || ||||||||||| || ||||||||||||||||
Sbjct: 345 tgttggaggttgttgagtccactggtgctactcaaatcttctttaaccatttatatgatc 404
Query: 320 cattgtcactagttagggatcacagagcaaaggaggttctgactgctcaaggcatcaccg 379
| ||||||| | ||||||||| ||||||| |||||||||||| |||| ||||| || |
Sbjct: 405 ccctgtcacttatcagggatcaccgagcaaaagaggttctgacttctcagggcataacag 464
Query: 380 tacgttccttcaattcagatttattgtatgagccatgggatgtgaatgatgctaatggcc 439
|||||||||||||| | |||||||| ||||| ||||||||||| |||||||| |||||||
Sbjct: 465 tacgttccttcaatgctgatttattatatgaaccatgggatgtcaatgatgccaatggcc 524
Query: 440 aaccattcacaacttttgatgctttttgggaaagatgccttaccatgccttatgacccac 499
|||||||||||||||| ||||||||||||| |||||| |||| |||||||||||| ||
Sbjct: 525 aaccattcacaactttcgatgctttttggggaagatgtcttagcatgccttatgatcccg 584
Query: 500 aagcacctcttcttccacctaaaaggattattccaggtgatgcatcaaggtgcccttctg 559
| |||||||||| |||||||||||||||||||||||||||| ||||| |||| ||| ||
Sbjct: 585 agtcacctcttctcccacctaaaaggattattccaggtgatgtatcaaagtgctcttgtg 644
Query: 560 atacattggtgtttgaagatgaatcagagaa 590
|| | ||| ||||||||||||||||||||||
Sbjct: 645 atgcgttgatgtttgaagatgaatcagagaa 675
Score = 103 bits (52), Expect = 2e-21
Identities = 103/120 (85%)
Strand = Plus / Plus
Query: 700 aggaaggctgacagtgccacaacctcattcctctccccgcatttgcattttggcgaggtg 759
|||||||| ||||||||||| || ||||| ||||| || |||||||||||||| ||||||
Sbjct: 675 aggaaggcagacagtgccactacatcatttctctcaccccatttgcattttggtgaggtg 734
Query: 760 agcgtcaagaaagttttccatcttgtccgaattaagcaagtcctttgggccaacgaagga 819
|| ||||| ||||| |||||||||||||| || || ||||| | |||||||| ||||||
Sbjct: 735 agtgtcaaaaaagtcttccatcttgtccgcatcaaacaagttttgtgggccaatgaagga 794