Miyakogusa Predicted Gene
- Lj1g3v3318570.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3318570.1 tr|B9GUW3|B9GUW3_POPTR Aquaporin, MIP family, NIP
subfamily OS=Populus trichocarpa GN=POPTRDRAFT_754,39,0.0002,MIP,Major
intrinsic protein; no description,Aquaporin-like;
NODULIN-26-RELATED,NULL; AQUAPORIN
TRANS,NODE_92482_length_941_cov_9.833157.path2.1
(450 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78363 similar to UniRef100_A2Q6E3 Cluster: Major intr... 460 e-129
gnl|LJGI|BP061829 115 2e-25
gnl|LJGI|TC82453 similar to UniRef100_Q9XGG7 Cluster: Nodulin26-... 54 8e-07
gnl|LJGI|TC57271 similar to UniRef100_Q8W4T7 Cluster: Multifunct... 52 3e-06
>gnl|LJGI|TC78363 similar to UniRef100_A2Q6E3 Cluster: Major intrinsic protein; n=1;
Medicago truncatula|Rep: Major intrinsic protein -
Medicago truncatula (Barrel medic), partial (31%)
Length = 710
Score = 460 bits (232), Expect = e-129
Identities = 242/244 (99%), Gaps = 1/244 (0%)
Strand = Plus / Plus
Query: 1 atgggtgccatactggccactgtgacactcaaagtgctgtatcatgacaaggtggacatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 atgggtgccatactggccactgtgacactcaaagtgctgtatcatgacaaggtggacatt 514
Query: 61 ggagtgacagtgactcaatacttaagctcaacttctgatcttgaagcattggtttgggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 ggagtgacagtgactcaatacttaagctcaacttctgatcttgaagcattggtttgggaa 574
Query: 121 ttcataatcacttccatactcatgttcactatttgcggtgctgcaactgatcacagaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 ttcataatcacttccatactcatgttcactatttgcggtgctgcaactgatcacagaggg 634
Query: 181 agcaaagatctcactggggttgcaattggcattgcagttatgattagcgccatcattgcc 240
|||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 635 agcaaagatctcactggggttgcaatgggcattgcag-tatgattagcgccatcattgcc 693
Query: 241 gggc 244
||||
Sbjct: 694 gggc 697
>gnl|LJGI|BP061829
Length = 512
Score = 115 bits (58), Expect = 2e-25
Identities = 58/58 (100%)
Strand = Plus / Minus
Query: 393 accagtgaaacctgagccatttcatatgtgcagtcataatcctttaactttgtgatcc 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 accagtgaaacctgagccatttcatatgtgcagtcataatcctttaactttgtgatcc 455
>gnl|LJGI|TC82453 similar to UniRef100_Q9XGG7 Cluster: Nodulin26-like major intrinsic
protein; n=1; Pisum sativum|Rep: Nodulin26-like major
intrinsic protein - Pisum sativum (Garden pea), partial
(86%)
Length = 1238
Score = 54.0 bits (27), Expect = 8e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 235 attgccgggcctattactggagcttccatgaatcctgcaaggagcttagcgcctgctat 293
||||||||||| || |||||||| || |||||||||||||| || |||| ||||||||
Sbjct: 899 attgccgggccaatcactggagcatcaatgaatcctgcaagaagtttaggacctgctat 957
>gnl|LJGI|TC57271 similar to UniRef100_Q8W4T7 Cluster: Multifunctional aquaporin;
n=1; Medicago truncatula|Rep: Multifunctional aquaporin
- Medicago truncatula (Barrel medic), partial (79%)
Length = 1225
Score = 52.0 bits (26), Expect = 3e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 235 attgccgggcctattactggagcttccatgaatcctgcaaggagcttagcgcctgctatt 294
|||||||| || || |||||||| || |||||||| ||||| ||||||| |||||||||
Sbjct: 691 attgccggaccaatcactggagcatcgatgaatccagcaagaagcttaggacctgctatt 750
Query: 295 gt 296
||
Sbjct: 751 gt 752