Miyakogusa Predicted Gene
- Lj1g3v3317320.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3317320.1 Non Chatacterized Hit- tr|I1J614|I1J614_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,88.23,0,OB_NTP_bind,Domain of unknown function DUF1605;
HA2,Helicase-associated domain;
Helicase_C,Helicase,,NODE_1303_length_2826_cov_42.743099.path2.1
(2175 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65544 similar to UniRef100_A7P496 Cluster: Chromosome... 1659 0.0
gnl|LJGI|TC67156 similar to UniRef100_A7P496 Cluster: Chromosome... 1108 0.0
gnl|LJGI|AV778401 149 9e-35
gnl|LJGI|TC67347 54 4e-06
>gnl|LJGI|TC65544 similar to UniRef100_A7P496 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (40%)
Length = 1155
Score = 1659 bits (837), Expect = 0.0
Identities = 852/857 (99%)
Strand = Plus / Plus
Query: 1319 tgccagagattaagcgctgcaacctttctaatgtcattttgcagcttaaggctttgggcg 1378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tgccagagattaagcgctgcaacctttctaatgtcattttgcagcttaaggctttgggcg 61
Query: 1379 ttgatgacatattagggtttgatttcattgagaaaccttcaagggcagctattataaaat 1438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ttgatgacatattagggtttgatttcattgagaaaccttcaagggcagctattataaaat 121
Query: 1439 cattggagcagctatttttattaggtgctctaacagatgagtgccatctatctgatccag 1498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 cattggagcagctatttttattaggtgctctaacagatgagtgccatctatctgatccag 181
Query: 1499 ttgggcgtcaaatggctcgactgcctttggatcctgtttatgccaaagctcttatttttg 1558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ttgggcgtcaaatggctcgactgcctttggatcctgtttatgccaaagctcttatttttg 241
Query: 1559 ctagtcagtttaactgcttggaagagatgttgataactgttgcaatgctttctgtggaat 1618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ctagtcagtttaactgcttggaagagatgttgataactgttgcaatgctttctgtggaat 301
Query: 1619 ccatattctatgttcctcgtgatatgttagcagagtcgagaattgcaacaaaatgcttct 1678
|||||||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||
Sbjct: 302 ccatattctatgctcctcgtgacaagttagaagagtcgagaattgcaacaaaatgcttct 361
Query: 1679 caagtccagagggagaccacatcactttgattaatgtgtatcgagcatctaatgatttct 1738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 caagtccagagggagaccacatcactttgattaatgtgtatcgagcatctaatgatttct 421
Query: 1739 tggagaagagatcaatggaaatgagtaaaccaaaaagtgaaaaggttttgagaaaatggt 1798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tggagaagagatcaatggaaatgagtaaaccaaaaagtgaaaaggttttgagaaaatggt 481
Query: 1799 gcaaggaaaattttattaatagccgttctcttagacatgcttgtgacattcacaggcaga 1858
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 482 gcaaggaaaattttattaatagccgttctcttagacatgcttgtggcattcacaggcaga 541
Query: 1859 ttaagggacatgttcaacagatgggtctgaatcttgcttcctgtggagatgatatgcttc 1918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ttaagggacatgttcaacagatgggtctgaatcttgcttcctgtggagatgatatgcttc 601
Query: 1919 aattccgcagatgccttgttgcttcctttttcctcaatgcagctataaagcagcctgatg 1978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 aattccgcagatgccttgttgcttcctttttcctcaatgcagctataaagcagcctgatg 661
Query: 1979 gaacctacagggctttggccagtggtcaggtggtgcagatccacccttcttctgtattat 2038
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 gaacctacagggctttggccagtggtcaggtggtgcagatccacccttcttctgtattat 721
Query: 2039 ttcggcaaaaaccagagtgtgtaatatttaacgaacttctccaaactaataacaagtatg 2098
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 ttcggcaaaaaccagagtgtgtaatatttaacgaacttctccaaactaataacaagtatg 781
Query: 2099 tccggaatttaactagagttgactacctatggttaactgaacttgctcctcagtactatg 2158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 tccggaatttaactagagttgactacctatggttaactgaacttgctcctcagtactatg 841
Query: 2159 ccatgcagaactaaatc 2175
|||||||||||||||||
Sbjct: 842 ccatgcagaactaaatc 858
>gnl|LJGI|TC67156 similar to UniRef100_A7P496 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 706
Score = 1108 bits (559), Expect = 0.0
Identities = 568/571 (99%)
Strand = Plus / Plus
Query: 1 atgccttctgtggctcccggaaatcacaatcaccctactgctgctactgccaatggcaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 atgccttctgtggctcccggaaatcacaatcaccctactgctgctactgccaatggcaag 195
Query: 61 ttctccaatgcaaatcggaatcgccaaacccagctcactcccgggagacaaaagcttgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 ttctccaatgcaaatcggaatcgccaaacccagctcactcccgggagacaaaagcttgca 255
Query: 121 caacagaggaagtctcttcccattgcttcagttgagaagaggcttgttgaagaggttcga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 caacagaggaagtctcttcccattgcttcagttgagaagaggcttgttgaagaggttcga 315
Query: 181 aagcatgatattttgattattgtcggcgaaactggaagtgggaaaaccacacagattccg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 aagcatgatattttgattattgtcggcgaaactggaagtgggaaaaccacacagattccg 375
Query: 241 cagtttctatttgatgctggactttgccatgatgggaaagttattggtataactcaaccc 300
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 376 cagtttctatttgatgctggactttgccatgatgggaaagttattgggataactcaaccc 435
Query: 301 agacgtgtggctgctgttactgtggccaaacgtgttgccgaggaatgtggtgttgagctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 agacgtgtggctgctgttactgtggccaaacgtgttgccgaggaatgtggtgttgagctg 495
Query: 361 ggccataaggttgggtattctgttagatttgacgatgctacttccagctcgacaaggatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ggccataaggttgggtattctgttagatttgacgatgctacttccagctcgacaaggatc 555
Query: 421 aaatatatgacagatggcttgcttctgagagaagcattgctggatccgtatctttctaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 aaatatatgacagatggcttgcttctgagagaagcattgctggatccgtatctttctaag 615
Query: 481 tattctgtcataatcgttgatgaagctcatgagagaactgtccatactgatgtgttgttg 540
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tattctgtcataatcgtcgatgaagctcatgagagaactgtccatactgatgtgttgttg 675
Query: 541 ggcttgttgaaaaatgtgcaacttactcggt 571
||||||||||||||||| |||||||||||||
Sbjct: 676 ggcttgttgaaaaatgtacaacttactcggt 706
>gnl|LJGI|AV778401
Length = 422
Score = 149 bits (75), Expect = 9e-35
Identities = 111/123 (90%)
Strand = Plus / Minus
Query: 2053 gagtgtgtaatatttaacgaacttctccaaactaataacaagtatgtccggaatttaact 2112
|||||||| ||||||| || |||||||| |||| || || ||||||||||| ||||||||
Sbjct: 418 gagtgtgtgatatttatcggacttctcccaactcattaccagtatgtccgggatttaact 359
Query: 2113 agagttgactacctatggttaactgaacttgctcctcagtactatgccatgcagaactaa 2172
|||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||| |
Sbjct: 358 agagttgactacctatggtttactgaacttgctcctccgtactatgccatgccgaactta 299
Query: 2173 atc 2175
|||
Sbjct: 298 atc 296
>gnl|LJGI|TC67347
Length = 645
Score = 54.0 bits (27), Expect = 4e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 208 gaaactggaagtgggaaaaccacacagattccgcagttt 246
|||||||| ||||| ||||||||||||||||| ||||||
Sbjct: 282 gaaactggtagtggtaaaaccacacagattcctcagttt 320