Miyakogusa Predicted Gene
- Lj1g3v3316260.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3316260.2 tr|I3T692|I3T692_LOTJA Ribulose bisphosphate
carboxylase small chain OS=Lotus japonicus PE=2
SV=1,96.13,0,RuBisCO_small,Ribulose bisphosphate carboxylase small
chain, domain; RbcS,Ribulose-1,5-bisphosphate ,CUFF.30679.2
(546 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58934 similar to UniRef100_Q9ZP07 Cluster: Ribulose 1... 1082 0.0
gnl|LJGI|TC66013 similar to UniRef100_O65194 Cluster: Ribulose b... 846 0.0
gnl|LJGI|TC63864 similar to UniRef100_Q9ZP07 Cluster: Ribulose 1... 821 0.0
gnl|LJGI|TC70891 similar to UniRef100_Q9ZP07 Cluster: Ribulose 1... 553 e-157
gnl|LJGI|TC60984 similar to UniRef100_Q39832 Cluster: Ribulose-1... 452 e-126
gnl|LJGI|BP034895 similar to UniRef100_P24007 Cluster: Ribulose ... 335 2e-91
gnl|LJGI|AV428935 similar to UniRef100_O65194 Cluster: Ribulose ... 333 7e-91
gnl|LJGI|AV422614 homologue to UniRef100_O65194 Cluster: Ribulos... 315 2e-85
gnl|LJGI|AV420075 similar to UniRef100_P32764 Cluster: Ribulose ... 301 2e-81
gnl|LJGI|TC67533 similar to UniRef100_P00869 Cluster: Ribulose b... 224 4e-58
gnl|LJGI|AV770261 similar to UniRef100_O65194 Cluster: Ribulose ... 220 7e-57
gnl|LJGI|DC597768 similar to UniRef100_P00865 Cluster: Ribulose ... 137 8e-32
gnl|LJGI|AV774656 similar to UniRef100_P24007 Cluster: Ribulose ... 123 1e-27
gnl|LJGI|AV773128 similar to UniRef100_O65194 Cluster: Ribulose ... 113 1e-24
gnl|LJGI|AV765033 similar to UniRef100_P00869 Cluster: Ribulose ... 82 4e-15
gnl|LJGI|BP054432 homologue to UniRef100_P10797 Cluster: Ribulos... 62 4e-09
>gnl|LJGI|TC58934 similar to UniRef100_Q9ZP07 Cluster: Ribulose 1,5-bisphosphate
carboxylase small subunit precursor; n=1; Cicer
arietinum|Rep: Ribulose 1,5-bisphosphate carboxylase
small subunit precursor - Cicer arietinum (Chickpea)
(Garbanzo), partial (98%)
Length = 791
Score = 1082 bits (546), Expect = 0.0
Identities = 546/546 (100%)
Strand = Plus / Plus
Query: 1 atggcttcctctatgatgacgtcctccgctgtcaccaccattaacggtgcctctccggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33 atggcttcctctatgatgacgtcctccgctgtcaccaccattaacggtgcctctccggca 92
Query: 61 caggccagcatggtggctccattcactggcctcaagtccatggctggcttcccagttaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 caggccagcatggtggctccattcactggcctcaagtccatggctggcttcccagttaga 152
Query: 121 aagacaaacaatgacattacctccattgcaaacaacggtggaagagtacaatgcatgcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 aagacaaacaatgacattacctccattgcaaacaacggtggaagagtacaatgcatgcag 212
Query: 181 gtgtggcctcctgttggcaagaagaagttcgagactctttcatacctgccaccactcacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 gtgtggcctcctgttggcaagaagaagttcgagactctttcatacctgccaccactcacc 272
Query: 241 acagagcaactgttaaaggaagttgaataccttcttaggaaggggtgggttccttgcttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 acagagcaactgttaaaggaagttgaataccttcttaggaaggggtgggttccttgcttg 332
Query: 301 gaatttgagacagagaaaggctttgtttaccgtgagaaccacaagtcaccgggatactat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gaatttgagacagagaaaggctttgtttaccgtgagaaccacaagtcaccgggatactat 392
Query: 361 gacggacggtactggaccatgtggaagctgcccatgtttggctgcagtgatgctgctcag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gacggacggtactggaccatgtggaagctgcccatgtttggctgcagtgatgctgctcag 452
Query: 421 gtgttgaaggagcttgatgaggctgtgaaggcataccccaatgctttcgttcgcatcatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 gtgttgaaggagcttgatgaggctgtgaaggcataccccaatgctttcgttcgcatcatc 512
Query: 481 ggattcgacaacgttcgccaagtgcagtgcatcagcttcattgctcacaggcctgcaggc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ggattcgacaacgttcgccaagtgcagtgcatcagcttcattgctcacaggcctgcaggc 572
Query: 541 tactaa 546
||||||
Sbjct: 573 tactaa 578
>gnl|LJGI|TC66013 similar to UniRef100_O65194 Cluster: Ribulose bisphosphate
carboxylase small chain, chloroplast precursor; n=1;
Medicago sativa|Rep: Ribulose bisphosphate carboxylase
small chain, chloroplast precursor - Medicago sativa
(Alfalfa), partial (96%)
Length = 844
Score = 846 bits (427), Expect = 0.0
Identities = 519/549 (94%), Gaps = 3/549 (0%)
Strand = Plus / Plus
Query: 1 atggcttcctctatgatgacgtcctccgctgtc---accaccattaacggtgcctctccg 57
||||||||||||||||| || ||||| |||| | ||||||||||| ||||||||||||
Sbjct: 39 atggcttcctctatgatcacctcctcagctgccgccaccaccattaaaggtgcctctccg 98
Query: 58 gcacaggccagcatggtggctccattcactggcctcaagtccatggctggcttcccagtt 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 gcacaggccagcatggtggctccattcactggcctcaagtccatggctggcttcccagtt 158
Query: 118 agaaagacaaacaatgacattacctccattgcaaacaacggtggaagagtacaatgcatg 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 agaaagacaaacaatgacattacctccattgcaaacaacggtggaagagtacaatgcatg 218
Query: 178 caggtgtggcctcctgttggcaagaagaagttcgagactctttcatacctgccaccactc 237
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 219 caggtgtggcctcctgttggcaagaagaagttcgagactctttcataccttccaccactc 278
Query: 238 accacagagcaactgttaaaggaagttgaataccttcttaggaaggggtgggttccttgc 297
|||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 279 accacagagcaactcttaaaggaagtagaataccttcttaggaagggttgggttccttgc 338
Query: 298 ttggaatttgagacagagaaaggctttgtttaccgtgagaaccacaagtcaccgggatac 357
|||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 339 ttggaattcgagacagagaaaggctttgtctaccgtgagaaccacaagtcacctggatac 398
Query: 358 tatgacggacggtactggaccatgtggaagctgcccatgtttggctgcagtgatgctgct 417
||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||| |
Sbjct: 399 tatgacggacgctactggaccatgtggaagctccccatgtttgggtgcagtgatgctacc 458
Query: 418 caggtgttgaaggagcttgatgaggctgtgaaggcataccccaatgctttcgttcgcatc 477
|||||||||||||| ||||||||||||||||||||||||||||| ||||| || ||||||
Sbjct: 459 caggtgttgaaggaacttgatgaggctgtgaaggcataccccaacgcttttgtgcgcatc 518
Query: 478 atcggattcgacaacgttcgccaagtgcagtgcatcagcttcattgctcacaggcctgca 537
|| ||||||||||| ||||||||||||||||||||||| |||||||| ||||| || |||
Sbjct: 519 attggattcgacaatgttcgccaagtgcagtgcatcagtttcattgcacacagaccagca 578
Query: 538 ggctactaa 546
|||||||||
Sbjct: 579 ggctactaa 587
>gnl|LJGI|TC63864 similar to UniRef100_Q9ZP07 Cluster: Ribulose 1,5-bisphosphate
carboxylase small subunit precursor; n=1; Cicer
arietinum|Rep: Ribulose 1,5-bisphosphate carboxylase
small subunit precursor - Cicer arietinum (Chickpea)
(Garbanzo), partial (98%)
Length = 860
Score = 821 bits (414), Expect = 0.0
Identities = 513/546 (93%)
Strand = Plus / Plus
Query: 1 atggcttcctctatgatgacgtcctccgctgtcaccaccattaacggtgcctctccggca 60
||||||||||||||||| || ||||| || ||||||||||||||| ||||||||||||||
Sbjct: 41 atggcttcctctatgatcacctcctctgccgtcaccaccattaacagtgcctctccggca 100
Query: 61 caggccagcatggtggctccattcactggcctcaagtccatggctggcttcccagttaga 120
||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 101 caggccaacatggtggctccattcactggcctcaagtccatggctggcttcccagtaaga 160
Query: 121 aagacaaacaatgacattacctccattgcaaacaacggtggaagagtacaatgcatgcag 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 aaggtcaacaatgacattacctccattgcaaacaacggtggaagagtacaatgcatgcag 220
Query: 181 gtgtggcctcctgttggcaagaagaagttcgagactctttcatacctgccaccactcacc 240
|||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 221 gtgtggcctcctattggcaagaagaagttcgagactctttcataccttccaccactcacc 280
Query: 241 acagagcaactgttaaaggaagttgaataccttcttaggaaggggtgggttccttgcttg 300
||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 281 acagagcaactcttaaaggaagtagaataccttctcaggaaggggtgggttccttgcttg 340
Query: 301 gaatttgagacagagaaaggctttgtttaccgtgagaaccacaagtcaccgggatactat 360
|| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 341 gagtttgagacagagaaaggctttgtctaccgtgagaaccacaagtcacctggatactat 400
Query: 361 gacggacggtactggaccatgtggaagctgcccatgtttggctgcagtgatgctgctcag 420
|||||||| |||||||||||||||||||| ||||||||||| |||||||||||| | |||
Sbjct: 401 gacggacgctactggaccatgtggaagctccccatgtttggatgcagtgatgctacccag 460
Query: 421 gtgttgaaggagcttgatgaggctgtgaaggcataccccaatgctttcgttcgcatcatc 480
||||||||||| ||||||||||||||||||||||||||||| ||||| || ||||||||
Sbjct: 461 gtgttgaaggaacttgatgaggctgtgaaggcataccccaacgcttttgtgcgcatcatt 520
Query: 481 ggattcgacaacgttcgccaagtgcagtgcatcagcttcattgctcacaggcctgcaggc 540
||||||||||| ||||||||||||||||||||||| |||||||| ||||| || ||||||
Sbjct: 521 ggattcgacaatgttcgccaagtgcagtgcatcagtttcattgcacacagaccagcaggc 580
Query: 541 tactaa 546
||||||
Sbjct: 581 tactaa 586
>gnl|LJGI|TC70891 similar to UniRef100_Q9ZP07 Cluster: Ribulose 1,5-bisphosphate
carboxylase small subunit precursor; n=1; Cicer
arietinum|Rep: Ribulose 1,5-bisphosphate carboxylase
small subunit precursor - Cicer arietinum (Chickpea)
(Garbanzo), partial (64%)
Length = 499
Score = 553 bits (279), Expect = e-157
Identities = 339/359 (94%)
Strand = Plus / Plus
Query: 188 ctcctgttggcaagaagaagttcgagactctttcatacctgccaccactcaccacagagc 247
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcctgttggcaagaagaagtttgagactctttcatacctgccaccactcaccacagagc 60
Query: 248 aactgttaaaggaagttgaataccttcttaggaaggggtgggttccttgcttggaatttg 307
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aactattaaaggaagtggaataccttcttaggaaggggtgggttccttgcttggaatttg 120
Query: 308 agacagagaaaggctttgtttaccgtgagaaccacaagtcaccgggatactatgacggac 367
|||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 121 agacggagaaaggctttgtctaccgtgagaaccacaagtcacctggatactatgacggac 180
Query: 368 ggtactggaccatgtggaagctgcccatgtttggctgcagtgatgctgctcaggtgttga 427
| |||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||
Sbjct: 181 gctactggaccatgtggaagctccccatgtttgggtgcagtgatgctgcccaggtgttga 240
Query: 428 aggagcttgatgaggctgtgaaggcataccccaatgctttcgttcgcatcatcggattcg 487
|||| |||||||||||||||||||||||||| | ||||| || |||||||| |||||||
Sbjct: 241 aggaacttgatgaggctgtgaaggcatacccgaccgcttttgtgcgcatcattggattcg 300
Query: 488 acaacgttcgccaagtgcagtgcatcagcttcattgctcacaggcctgcaggctactaa 546
|||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 301 acaatgttcgccaagtgcagtgcatcagcttcattgcacacaggccagcaggctactaa 359
>gnl|LJGI|TC60984 similar to UniRef100_Q39832 Cluster: Ribulose-1,5-bisphosphate
carboxylase small subunit precursor; n=1; Glycine
max|Rep: Ribulose-1,5-bisphosphate carboxylase small
subunit precursor - Glycine max (Soybean), partial (98%)
Length = 789
Score = 452 bits (228), Expect = e-126
Identities = 422/486 (86%), Gaps = 3/486 (0%)
Strand = Plus / Plus
Query: 64 gccagcatggtggctccattcactggcctcaagtccatggctggcttcccagtta---ga 120
|||| |||||| || ||||||||||| ||||| ||||||||||| |||||||||| ||
Sbjct: 83 gccaacatggttgccccattcactggtctcaaatccatggctggtttcccagttacaaga 142
Query: 121 aagacaaacaatgacattacctccattgcaaacaacggtggaagagtacaatgcatgcag 180
||| | ||||||||||| ||||||||||||| ||| ||||||||||| | |||||||||
Sbjct: 143 aaggccaacaatgacatcacctccattgcaagcaatggtggaagagtcaactgcatgcag 202
Query: 181 gtgtggcctcctgttggcaagaagaagttcgagactctttcatacctgccaccactcacc 240
||||||||||| |||||||||||||||| ||||| ||||| ||||| ||||||||||||
Sbjct: 203 gtgtggcctccaattggcaagaagaagtttgagaccctttcttaccttccaccactcacc 262
Query: 241 acagagcaactgttaaaggaagttgaataccttcttaggaaggggtgggttccttgcttg 300
|||||| || ||||||||| ||||||||| | |||||||| |||||||||||||||
Sbjct: 263 gtggagcaattggcaaaggaagtagaataccttatcaggaagggatgggttccttgcttg 322
Query: 301 gaatttgagacagagaaaggctttgtttaccgtgagaaccacaagtcaccgggatactat 360
||||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||||
Sbjct: 323 gaatttgagactgagaaagggtttgtgtaccgtgagaaccacaagtcaccaggatactat 382
Query: 361 gacggacggtactggaccatgtggaagctgcccatgtttggctgcagtgatgctgctcag 420
|| ||||| |||||||| ||||||||||||||||||||||| || ||||||| |||||
Sbjct: 383 gatggacgttactggacaatgtggaagctgcccatgtttggaaccactgatgcttctcag 442
Query: 421 gtgttgaaggagcttgatgaggctgtgaaggcataccccaatgctttcgttcgcatcatc 480
|| |||||||| ||||| ||||| ||||||||||||||| || ||| | || ||||||
Sbjct: 443 gttttgaaggaacttgaggaggccaagaaggcataccccaacgccttcatccgtatcatc 502
Query: 481 ggattcgacaacgttcgccaagtgcagtgcatcagcttcattgctcacaggcctgcaggc 540
|||||||||||| |||||||||||||||||||| ||||| || |||||||| | ||||
Sbjct: 503 ggattcgacaacaagcgccaagtgcagtgcatcagtttcatcgcacacaggccagaaggc 562
Query: 541 tactaa 546
||||||
Sbjct: 563 tactaa 568
>gnl|LJGI|BP034895 similar to UniRef100_P24007 Cluster: Ribulose bisphosphate
carboxylase small chain, chloroplast precursor; n=1;
Pyrus pyrifolia|Rep: Ribulose bisphosphate carboxylase
small chain, chloroplast precursor - Pyrus pyrifolia
(Japanese pear) (Pyrus serotina), partial (40%)
Length = 500
Score = 335 bits (169), Expect = 2e-91
Identities = 217/233 (93%)
Strand = Plus / Minus
Query: 314 agaaaggctttgtttaccgtgagaaccacaagtcaccgggatactatgacggacggtact 373
||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 367 agaaaggctttgtctaccgtgagaaccacaagtcacctggatactatgacggacgctact 308
Query: 374 ggaccatgtggaagctgcccatgtttggctgcagtgatgctgctcaggtgttgaaggagc 433
|||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||| |
Sbjct: 307 ggaccatgtggaagctccccatgtttgggtgcagtgatgctgcccaggtgttgaaggaac 248
Query: 434 ttgatgaggctgtgaaggcataccccaatgctttcgttcgcatcatcggattcgacaacg 493
||||||||||||||||||||||||| | ||||| || |||||||| ||||||||||| |
Sbjct: 247 ttgatgaggctgtgaaggcatacccgaccgcttttgtgcgcatcattggattcgacaatg 188
Query: 494 ttcgccaagtgcagtgcatcagcttcattgctcacaggcctgcaggctactaa 546
||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 187 ttcgccaagtgcagtgcatcagcttcattgcacacaggccagcaggctactaa 135
>gnl|LJGI|AV428935 similar to UniRef100_O65194 Cluster: Ribulose bisphosphate
carboxylase small chain, chloroplast precursor; n=1;
Medicago sativa|Rep: Ribulose bisphosphate carboxylase
small chain, chloroplast precursor - Medicago sativa
(Alfalfa), partial (38%)
Length = 339
Score = 333 bits (168), Expect = 7e-91
Identities = 215/228 (94%), Gaps = 2/228 (0%)
Strand = Plus / Plus
Query: 189 tcctgttggcaagaagaagttcgagactctttcatacctgccaccactcaccacagagca 248
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcctgttggcaagaagaaatttgagactctttcatacctgccaccactcaccacagagca 60
Query: 249 actgttaaaggaagttgaataccttcttaggaaggggtgggttccttgcttggaatttga 308
||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 61 actattaaaggaagtggaataccttcttatgaaggggtgggttccttgcttggaatttga 120
Query: 309 gacagagaaaggctttgtttaccgtgagaaccacaagtcaccgggatactatgacggacg 368
||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 121 gacggagaaaggctttgtctaccgtgagaaccacaagtcacctggatactatgacggacg 180
Query: 369 gtactggaccatgtggaagctgcccatgtttggctgcagtgatgctgc 416
|||||||||||||||||||| |||||| |||| |||||||| |||||
Sbjct: 181 ctactggaccatgtggaagct-cccatg-ttgggtgcagtgaagctgc 226
>gnl|LJGI|AV422614 homologue to UniRef100_O65194 Cluster: Ribulose bisphosphate
carboxylase small chain, chloroplast precursor; n=1;
Medicago sativa|Rep: Ribulose bisphosphate carboxylase
small chain, chloroplast precursor - Medicago sativa
(Alfalfa), partial (34%)
Length = 276
Score = 315 bits (159), Expect = 2e-85
Identities = 180/187 (96%)
Strand = Plus / Plus
Query: 189 tcctgttggcaagaagaagttcgagactctttcatacctgccaccactcaccacagagca 248
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcctgttggcaagaagaagtttgagactctttcatacctgccaccactcaccacagagca 60
Query: 249 actgttaaaggaagttgaataccttcttaggaaggggtgggttccttgcttggaatttga 308
||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 actattaaaggaagtggaataccttcttaggaaggggtgggttccttgcttggaatttga 120
Query: 309 gacagagaaaggctttgtttaccgtgagaaccacaagtcaccgggatactatgacggacg 368
||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 121 gacggagaaaggctttgtctaccgtgagaaccacaagtcacctggatactatgacggacg 180
Query: 369 gtactgg 375
||||||
Sbjct: 181 ctactgg 187
>gnl|LJGI|AV420075 similar to UniRef100_P32764 Cluster: Ribulose bisphosphate
carboxylase small chain 3, chloroplast precursor; n=1;
Solanum tuberosum|Rep: Ribulose bisphosphate carboxylase
small chain 3, chloroplast precursor - Solanum tuberosum
(Potato), partial (55%)
Length = 384
Score = 301 bits (152), Expect = 2e-81
Identities = 257/292 (88%)
Strand = Plus / Plus
Query: 255 aaaggaagttgaataccttcttaggaaggggtgggttccttgcttggaatttgagacaga 314
||||||||| ||||||||| | |||||||| |||||||||||||||||||||||||| ||
Sbjct: 18 aaaggaagtagaataccttatcaggaagggatgggttccttgcttggaatttgagactga 77
Query: 315 gaaaggctttgtttaccgtgagaaccacaagtcaccgggatactatgacggacggtactg 374
|||||| ||||| ||||||||||||||||||||||| ||||||||||| ||||| |||||
Sbjct: 78 gaaagggtttgtgtaccgtgagaaccacaagtcaccaggatactatgatggacgttactg 137
Query: 375 gaccatgtggaagctgcccatgtttggctgcagtgatgctgctcaggtgttgaaggagct 434
||| ||||||||||||||||||||||| || ||||||| ||||||| |||||||| ||
Sbjct: 138 gacaatgtggaagctgcccatgtttggaaccactgatgcttctcaggttttgaaggaact 197
Query: 435 tgatgaggctgtgaaggcataccccaatgctttcgttcgcatcatcggattcgacaacgt 494
||| ||||| ||||||||||||||| || ||| | || ||||||||||||||||||
Sbjct: 198 tgaggaggccaagaaggcataccccaacgccttcatccgtatcatcggattcgacaacaa 257
Query: 495 tcgccaagtgcagtgcatcagcttcattgctcacaggcctgcaggctactaa 546
|||||||||||||||||||| ||||| || |||||||| | ||||||||||
Sbjct: 258 gcgccaagtgcagtgcatcagtttcatcgcacacaggccagaaggctactaa 309
>gnl|LJGI|TC67533 similar to UniRef100_P00869 Cluster: Ribulose bisphosphate
carboxylase small chain 3C, chloroplast precursor; n=2;
Pisum sativum|Rep: Ribulose bisphosphate carboxylase
small chain 3C, chloroplast precursor - Pisum sativum
(Garden pea), partial (43%)
Length = 664
Score = 224 bits (113), Expect = 4e-58
Identities = 203/233 (87%)
Strand = Plus / Plus
Query: 314 agaaaggctttgtttaccgtgagaaccacaagtcaccgggatactatgacggacggtact 373
||||||| ||||| ||||||||||||||||||||||| ||||||||||| ||||| ||||
Sbjct: 158 agaaagggtttgtgtaccgtgagaaccacaagtcaccaggatactatgatggacgttact 217
Query: 374 ggaccatgtggaagctgcccatgtttggctgcagtgatgctgctcaggtgttgaaggagc 433
|||| ||||||||||||||||||||||| || ||||||| ||||||| |||||||| |
Sbjct: 218 ggacaatgtggaagctgcccatgtttggaaccactgatgcttctcaggttttgaaggaac 277
Query: 434 ttgatgaggctgtgaaggcataccccaatgctttcgttcgcatcatcggattcgacaacg 493
|||| ||||| ||||||||||||||| || ||| | || ||||||||||||||||||
Sbjct: 278 ttgaggaggccaagaaggcataccccaacgccttcatccgtatcatcggattcgacaaca 337
Query: 494 ttcgccaagtgcagtgcatcagcttcattgctcacaggcctgcaggctactaa 546
|||||||||||||||||||| ||||| || |||||||| | ||||||||||
Sbjct: 338 agcgccaagtgcagtgcatcagtttcatcgcacacaggccagaaggctactaa 390
>gnl|LJGI|AV770261 similar to UniRef100_O65194 Cluster: Ribulose bisphosphate
carboxylase small chain, chloroplast precursor; n=1;
Medicago sativa|Rep: Ribulose bisphosphate carboxylase
small chain, chloroplast precursor - Medicago sativa
(Alfalfa), partial (47%)
Length = 543
Score = 220 bits (111), Expect = 7e-57
Identities = 217/252 (86%), Gaps = 4/252 (1%)
Strand = Plus / Plus
Query: 64 gccagcatggtggctccattcactggcctcaagtccatggctggcttcccagtta----g 119
|||| |||||| || ||||||||||| ||||| ||||||||||| |||||||||| |
Sbjct: 59 gccaacatggttgccccattcactggtctcaaatccatggctggtttcccagttacaagg 118
Query: 120 aaagacaaacaatgacattacctccattgcaaacaacggtggaagagtacaatgcatgca 179
|||| | ||||||||||| ||||||||||||| ||| ||||||||||| | ||||||||
Sbjct: 119 aaaggccaacaatgacatcacctccattgcaagcaatggtggaagagtcaactgcatgca 178
Query: 180 ggtgtggcctcctgttggcaagaagaagttcgagactctttcatacctgccaccactcac 239
|||||||||||| | |||||||||||||||||||| ||||| ||||| |||||||||||
Sbjct: 179 ggtgtggcctccaataggcaagaagaagttcgagaccctttcttaccttccaccactcac 238
Query: 240 cacagagcaactgttaaaggaagttgaataccttcttaggaaggggtgggttccttgctt 299
| |||||| | ||||||||| ||||||||| | |||||||| ||||||||||||||
Sbjct: 239 cgtggagcaataggcaaaggaagtagaataccttatcaggaagggatgggttccttgctt 298
Query: 300 ggaatttgagac 311
||||||||||||
Sbjct: 299 ggaatttgagac 310
>gnl|LJGI|DC597768 similar to UniRef100_P00865 Cluster: Ribulose bisphosphate
carboxylase small chain 1, chloroplast precursor; n=1;
Glycine max|Rep: Ribulose bisphosphate carboxylase small
chain 1, chloroplast precursor - Glycine max (Soybean),
partial (56%)
Length = 573
Score = 137 bits (69), Expect = 8e-32
Identities = 117/133 (87%)
Strand = Plus / Plus
Query: 179 aggtgtggcctcctgttggcaagaagaagttcgagactctttcatacctgccaccactca 238
||||||||||||| |||||||||||||||| ||||| ||||| ||||| ||||||||||
Sbjct: 322 aggtgtggcctccaattggcaagaagaagtttgagaccctttcttaccttccaccactca 381
Query: 239 ccacagagcaactgttaaaggaagttgaataccttcttaggaaggggtgggttccttgct 298
|| |||||| || ||||||||| ||||||||| | |||||||| |||||||||||||
Sbjct: 382 ccgtggagcaattggcaaaggaagtagaataccttatcaggaagggatgggttccttgct 441
Query: 299 tggaatttgagac 311
|||||||||||||
Sbjct: 442 tggaatttgagac 454
Score = 103 bits (52), Expect = 1e-21
Identities = 105/122 (86%), Gaps = 3/122 (2%)
Strand = Plus / Plus
Query: 64 gccagcatggtggctccattcactggcctcaagtccatggctggcttcccagtta---ga 120
|||| |||||| || ||||||||||| ||||| ||||||||||| |||||||||| ||
Sbjct: 60 gccaacatggttgccccattcactggtctcaaatccatggctggtttcccagttacaaga 119
Query: 121 aagacaaacaatgacattacctccattgcaaacaacggtggaagagtacaatgcatgcag 180
||| | ||||||||||| ||||||||||||| ||| ||||||||||| | |||||||||
Sbjct: 120 aaggccaacaatgacatcacctccattgcaagcaatggtggaagagtcaactgcatgcag 179
Query: 181 gt 182
||
Sbjct: 180 gt 181
>gnl|LJGI|AV774656 similar to UniRef100_P24007 Cluster: Ribulose bisphosphate
carboxylase small chain, chloroplast precursor; n=1;
Pyrus pyrifolia|Rep: Ribulose bisphosphate carboxylase
small chain, chloroplast precursor - Pyrus pyrifolia
(Japanese pear) (Pyrus serotina), partial (32%)
Length = 456
Score = 123 bits (62), Expect = 1e-27
Identities = 101/114 (88%)
Strand = Plus / Minus
Query: 330 ccgtgagaaccacaagtcaccgggatactatgacggacggtactggaccatgtggaagct 389
||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||
Sbjct: 444 ccgtgagaaccacaagtcaccaggatactatgatggacggtactggaccatctggaagct 385
Query: 390 gcccatgtttggctgcagtgatgctgctcaggtgttgaaggagcttgatgaggc 443
|||||||||||| | ||||||| |||||| |||||||| ||||| |||||
Sbjct: 384 gcccatgtttgggacccctgatgcttttcaggttttgaaggaacttgaggaggc 331
>gnl|LJGI|AV773128 similar to UniRef100_O65194 Cluster: Ribulose bisphosphate
carboxylase small chain, chloroplast precursor; n=1;
Medicago sativa|Rep: Ribulose bisphosphate carboxylase
small chain, chloroplast precursor - Medicago sativa
(Alfalfa), partial (24%)
Length = 531
Score = 113 bits (57), Expect = 1e-24
Identities = 114/132 (86%), Gaps = 1/132 (0%)
Strand = Plus / Plus
Query: 181 gtgtggcctcctgttggcaagaagaagttcgagactctttcatacctgccaccactcacc 240
||||||||||| | |||||||||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 144 gtgtggcctccaatgggcaagaagaagttcgagaccctttcttaccttccaccactcacc 203
Query: 241 acag-agcaactgttaaaggaagttgaataccttcttaggaaggggtgggttccttgctt 299
| | ||||| | ||||||||| |||||||| | |||||||| ||||||||||||||
Sbjct: 204 gcggcagcaatnggcaaaggaagtacaataccttatcaggaagggatgggttccttgctt 263
Query: 300 ggaatttgagac 311
||||||||||||
Sbjct: 264 ggaatttgagac 275
>gnl|LJGI|AV765033 similar to UniRef100_P00869 Cluster: Ribulose bisphosphate
carboxylase small chain 3C, chloroplast precursor; n=2;
Pisum sativum|Rep: Ribulose bisphosphate carboxylase
small chain 3C, chloroplast precursor - Pisum sativum
(Garden pea), partial (27%)
Length = 479
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 332 gtgagaaccacaagtcaccgggatactatgacggacggtactggaccatgtggaagctgc 391
|||||| |||||||||||| ||||||||||| ||||| ||||| | |||||||||||||
Sbjct: 436 gtgagagccacaagtcaccaggatactatgatggacgtaactggccaatgtggaagctgc 377
Query: 392 ccatgtttg 400
|||||||||
Sbjct: 376 ccatgtttg 368
>gnl|LJGI|BP054432 homologue to UniRef100_P10797 Cluster: Ribulose bisphosphate
carboxylase small chain 2B, chloroplast precursor; n=1;
Arabidopsis thaliana|Rep: Ribulose bisphosphate
carboxylase small chain 2B, chloroplast precursor -
Arabidopsis thaliana (Mouse-ear cress), partial (34%)
Length = 369
Score = 61.9 bits (31), Expect = 4e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 454 taccccaatgctttcgttcgcatcatcggattcgacaacgttcgccaagtgcagtgcatc 513
||||||||||| ||| || | |||||||||||||||||| || ||||| |||||||||
Sbjct: 274 taccccaatgccttcattaggatcatcggattcgacaacacccgtcaagtccagtgcatc 215
Query: 514 agcttcattgc 524
|| ||||||||
Sbjct: 214 agtttcattgc 204