Miyakogusa Predicted Gene

Lj1g3v3257720.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3257720.2 CUFF.30286.2
         (318 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68979 UniRef100_Q2P3D4 Cluster: Succinate dehydrogena...   438   e-123

>gnl|LJGI|TC68979 UniRef100_Q2P3D4 Cluster: Succinate dehydrogenase membrane anchor
           subunit; n=2; Xanthomonas oryzae pv. oryzae|Rep:
           Succinate dehydrogenase membrane anchor subunit -
           Xanthomonas oryzae pv. oryzae (strain MAFF 311018),
           partial (9%)
          Length = 755

 Score =  438 bits (221), Expect = e-123
 Identities = 224/225 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggttggttggagagacaacactcagagactcaacctctctgtgttgctttctttcca 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 68  atgggttggttggagagacaacactcagagactcaacctctctgtgttgctttccttcca 127

                                                                       
Query: 61  attccgcccattcctataatttctaatggctactccctttccctttgctctctgaatctc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 attccgcccattcctataatttctaatggctactccctttccctttgctctctgaatctc 187

                                                                       
Query: 121 acttcttcattttccacccaaacactgcttaattgttttctctctacatcttttactcat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 acttcttcattttccacccaaacactgcttaattgttttctctctacatcttttactcat 247

                                                        
Query: 181 gcaggatcttgtttaattgtccttagatttgagatctgtaattgg 225
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 gcaggatcttgtttaattgtccttagatttgagatctgtaattgg 292



 Score =  188 bits (95), Expect = 1e-47
 Identities = 95/95 (100%)
 Strand = Plus / Plus

                                                                       
Query: 224 gggcaatgggggcaaagttggagtcctttgagatggtacaaggcaaagggaaaagggagt 283
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gggcaatgggggcaaagttggagtcctttgagatggtacaaggcaaagggaaaagggagt 564

                                              
Query: 284 tcttgatacagcaggtaaaggaagaaccaccctga 318
           |||||||||||||||||||||||||||||||||||
Sbjct: 565 tcttgatacagcaggtaaaggaagaaccaccctga 599