Miyakogusa Predicted Gene
- Lj1g3v3256690.4
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3256690.4 Non Chatacterized Hit- tr|I1N5L9|I1N5L9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52171
PE,74.44,0,MatE,Multi antimicrobial extrusion protein; matE: MATE
efflux family protein,Multi antimicrobial ext,CUFF.30271.4
(1470 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60859 weakly similar to UniRef100_A7QTE8 Cluster: Chr... 335 5e-91
gnl|LJGI|TC79696 weakly similar to UniRef100_A7QTE8 Cluster: Chr... 176 3e-43
>gnl|LJGI|TC60859 weakly similar to UniRef100_A7QTE8 Cluster: Chromosome undetermined
scaffold_167, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_167,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (36%)
Length = 765
Score = 335 bits (169), Expect = 5e-91
Identities = 463/561 (82%)
Strand = Plus / Plus
Query: 111 catggcagctccaatggtggctgtgacagtttctcagtaccttctgcaagttgtgtcact 170
|||||||||||||||||||||||||||||| || || |||||||||||||| ||||| ||
Sbjct: 205 catggcagctccaatggtggctgtgacagtgtcacaataccttctgcaagtggtgtccct 264
Query: 171 catgatggtgggacatcttgggattctagcctccttctctggggtggctattgccacctc 230
||||||||||||||| || | || | ||||||||||||||| || ||||| | |||
Sbjct: 265 tatgatggtgggacattttagtgaacttgtctccttctctggggttgccattgctatctc 324
Query: 231 ttttgctgaagttactggctttggtgttctgctcggaatggctggtgcattggaaacttt 290
||||||||||| || || || |||| || | |||||| | |||||||||||||||||
Sbjct: 325 ctttgctgaagtcaccggattcagtgtccttttaggaatgtcaggtgcattggaaacttt 384
Query: 291 atgtggccaaacctatggtgctgaggatttcagaaagattgggaactacacttgctgtgc 350
|||||||||||| | |||||| || || || ||||| | || |||||||| ||||||||
Sbjct: 385 atgtggccaaacttttggtgcagaagagtttggaaagctgggaaactacacgtgctgtgc 444
Query: 351 aatttgcacgctgactttggtttgtgtccccataactctcatatggatattcacagataa 410
||||| ||| ||| |||| ||| |||||||| ||||| | ||| ||||||| ||| |
Sbjct: 445 aattttcactctggttttgacctgtatccccatatctctcctgtgggtattcactgatca 504
Query: 411 aatactcttgctgtttggtcaagaacctgaaatttctcatgcagctcgggaatactgcat 470
| ||||| |||||||||||||||| |||| |||||| || |||||||| || ||||| |
Sbjct: 505 agtactcatgctgtttggtcaagaccctggaatttcccacgcagctcgcgagtactgtgt 564
Query: 471 gtgcctgatccctgcactctatggctacgccgttcttcaatctctgattcgctacttcca 530
| ||| || || | || | |||| | || ||||||||||||||||| |||||||||||
Sbjct: 565 ctacctcattccggggctatttggccatgctgttcttcaatctctgatccgctacttcca 624
Query: 531 gactcagagtatgatctttcccatggttttcagctcaattgcggttctgtgtttgcatgt 590
||||||||| |||||| ||||||||||||| |||||| || | | ||| |||||||||||
Sbjct: 625 gactcagagcatgatcattcccatggtttttagctcagttactgctctatgtttgcatgt 684
Query: 591 acctatatgttggggactggtgtttaaattgggaatgggacatgttggagcagcatttgc 650
|| || |||||| | ||||||||||| |||| | | |||||||||||||||||||| ||
Sbjct: 685 tccaatttgttggtgtctggtgtttaagttggaactaggacatgttggagcagcattagc 744
Query: 651 cattgcaatttcatattggtt 671
|||| |||||||||||||||
Sbjct: 745 tattggaatttcatattggtt 765
>gnl|LJGI|TC79696 weakly similar to UniRef100_A7QTE8 Cluster: Chromosome undetermined
scaffold_167, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_167, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(32%)
Length = 868
Score = 176 bits (89), Expect = 3e-43
Identities = 353/441 (80%)
Strand = Plus / Plus
Query: 887 tttcaatctgccttaacacaactacattgcactacttcattccttacgcaattggagctt 946
||||| |||||||||||||||| ||| ||||||||||| || |||| || ||||||||
Sbjct: 1 tttcagtctgccttaacacaaccacactgcactacttcgttacttatgctgttggagctg 60
Query: 947 ctgcaagtactcgagtttcgaatgaattgggagcagggaatccaagggcagctcaaggtt 1006
||||||| ||||| ||||| |||||| | |||||||||||||||| | ||||| ||||
Sbjct: 61 ctgcaagcactcgggtttcaaatgaactaggagcagggaatccaaagacagctaaaggcg 120
Query: 1007 ctgttaatgttgttgtgattcttggagttgctgatgcagttattgtcagcattttgtttg 1066
||||| || ||||||||| |||| ||| || || | ||||||||| || ||
Sbjct: 121 ctgttcgcgtggttgtgattgttgggattgtagaagccatcattgtcagcgcattcttca 180
Query: 1067 tttgttgtaggcatatattaggctatgcttacagcaatgacaaggaagttgcagattatg 1126
|||||| || || ||||||| |||||||| ||||||||||||||||| | ||||| |
Sbjct: 181 tttgtttccggaatgtattaggatatgcttatagcaatgacaaggaagtggtggattacg 240
Query: 1127 ttgcagacatggttccctttctttgtgtgtctgttagtgtagatagtctaataggagttt 1186
|||||||||||| |||| ||||||||| |||||||| || ||||||||||| ||||
Sbjct: 241 ttgcagacatggctccccttctttgtgggtctgttattggtgatagtctaattggagcac 300
Query: 1187 tttctggtattgcaagagggggaggatttcagaaaactggagcttatgtgaaccttggag 1246
|||| || |||| || || |||||||||||| ||| |||||||||| ||||| ||||
Sbjct: 301 tttcaggggttgctaggggtggaggatttcagcaaataggagcttatgcaaacctgggag 360
Query: 1247 cctattatctcgtaggtatccctatagcattggtattgggttttgtcttacatcttaatg 1306
| |||||| | || || || ||||| | ||| ||||||||||| | | ||||| ||||
Sbjct: 361 catattatgttgtgggaattcctattggtttgttattgggttttcacctgcatctaaatg 420
Query: 1307 ccaagggactctggataggaa 1327
||||||| |||||||| ||||
Sbjct: 421 ccaaggggctctggatgggaa 441