Miyakogusa Predicted Gene
- Lj1g3v3256680.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3256680.1 Non Chatacterized Hit- tr|I1KFS3|I1KFS3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.50631 PE,75.42,0,matE:
MATE efflux family protein,Multi antimicrobial extrusion protein;
MatE,Multi antimicrobial ext,CUFF.30268.1
(1455 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS332676 similar to UniRef100_A7QTE8 Cluster: Chromosom... 1215 0.0
gnl|LJGI|BI417549 weakly similar to UniRef100_A7QTE8 Cluster: Ch... 793 0.0
gnl|LJGI|FS359195 weakly similar to UniRef100_A7QTE8 Cluster: Ch... 420 e-116
>gnl|LJGI|FS332676 similar to UniRef100_A7QTE8 Cluster: Chromosome undetermined
scaffold_167, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_167,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (32%)
Length = 699
Score = 1215 bits (613), Expect = 0.0
Identities = 613/613 (100%)
Strand = Plus / Plus
Query: 1 atggaagaaggttcagagaccgggaagaaaacgaagatgacgccattgatggatgagctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 atggaagaaggttcagagaccgggaagaaaacgaagatgacgccattgatggatgagctg 146
Query: 61 aagaaggttggcaaaatagcggcaccaatggtggtggtgactgtgctgcaatatcttctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 aagaaggttggcaaaatagcggcaccaatggtggtggtgactgtgctgcaatatcttctg 206
Query: 121 caagtggcgtcagtgataatggttggacatcttagccagctctctctttcaagtgtggct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 caagtggcgtcagtgataatggttggacatcttagccagctctctctttcaagtgtggct 266
Query: 181 attgcaacctccctcaccaatgtttctggctttagcgttttgtcagggatggctggtgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 attgcaacctccctcaccaatgtttctggctttagcgttttgtcagggatggctggtgga 326
Query: 241 ttggaaactctatgtggccaagcttttggagcacaacaatatgaaaaatttggaacatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ttggaaactctatgtggccaagcttttggagcacaacaatatgaaaaatttggaacatat 386
Query: 301 acctacactgcagtaatatccctcactatggcttctgcaccaatcactgttctatggatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 acctacactgcagtaatatccctcactatggcttctgcaccaatcactgttctatggatt 446
Query: 361 ttcttggacaaaatactaatgttcataggtcaagaccatgaaatttcccatgaagctcag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ttcttggacaaaatactaatgttcataggtcaagaccatgaaatttcccatgaagctcag 506
Query: 421 aaatatgccctttggcttatacctgctctgtttgcctcagctattctgaaacctctaacg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 aaatatgccctttggcttatacctgctctgtttgcctcagctattctgaaacctctaacg 566
Query: 481 cggtttttccagactcagagtttgatttctccattgattctaagctcttttgtggttttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 cggtttttccagactcagagtttgatttctccattgattctaagctcttttgtggttttg 626
Query: 541 tgctttcatgtggtgactagttggtgcctggtgtttaagttggggttcggacatattggt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tgctttcatgtggtgactagttggtgcctggtgtttaagttggggttcggacatattggt 686
Query: 601 actgcaattggct 613
|||||||||||||
Sbjct: 687 actgcaattggct 699
>gnl|LJGI|BI417549 weakly similar to UniRef100_A7QTE8 Cluster: Chromosome undetermined
scaffold_167, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_167, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(27%)
Length = 404
Score = 793 bits (400), Expect = 0.0
Identities = 403/404 (99%)
Strand = Plus / Plus
Query: 658 gtgaagtgctcctctgcttgtgagaaaacaaggactccattttctaagagggctttgtct 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgaagtgctcctctgcttgtgagaaaacaaggactccattttctaagagggctttgtct 60
Query: 718 ggtttaggagagttctttcgcctcgctgtcccttcagcagctatggtttgcgtcaaatgg 777
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 61 ggtttaggagagttctttcgcctctctgtcccttcagcagctatggtttgcgtcaaatgg 120
Query: 778 tgggcaagtgagttgcttgttttgctggctggacttttttccaatccagagctggagaca 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgggcaagtgagttgcttgttttgctggctggacttttttccaatccagagctggagaca 180
Query: 838 tcaattctctctatatgcttgacaatctctacattgcacttcaccataccctacggattt 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcaattctctctatatgcttgacaatctctacattgcacttcaccataccctacggattt 240
Query: 898 ggggttgctgctagcactagagttgcaaatgaattgggagctgggaatccaaaagcagct 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggggttgctgctagcactagagttgcaaatgaattgggagctgggaatccaaaagcagct 300
Query: 958 agagtggttgtttctatagccatgtcccttgcatttatagaggctgtcattgtgagcaca 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agagtggttgtttctatagccatgtcccttgcatttatagaggctgtcattgtgagcaca 360
Query: 1018 gccctgtttggcttcagacacatcctaggttatgcctatagcag 1061
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gccctgtttggcttcagacacatcctaggttatgcctatagcag 404
>gnl|LJGI|FS359195 weakly similar to UniRef100_A7QTE8 Cluster: Chromosome undetermined
scaffold_167, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_167, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(9%)
Length = 658
Score = 420 bits (212), Expect = e-116
Identities = 212/212 (100%)
Strand = Plus / Minus
Query: 1244 gctttgttgcacatttcagatcaaagggcctttggattggaatagtttcaggctccattg 1303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 gctttgttgcacatttcagatcaaagggcctttggattggaatagtttcaggctccattg 599
Query: 1304 tccaaataattttcctcttcctcatcactgctcttacaaactggaaaaaacaggcaatga 1363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 tccaaataattttcctcttcctcatcactgctcttacaaactggaaaaaacaggcaatga 539
Query: 1364 tggcaagggtgagaatacttgatatatcttcggaagtaagtgaagaaaatcacacaacaa 1423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 tggcaagggtgagaatacttgatatatcttcggaagtaagtgaagaaaatcacacaacaa 479
Query: 1424 gggcagcaaatcacacaacaagtgcctaaagt 1455
||||||||||||||||||||||||||||||||
Sbjct: 478 gggcagcaaatcacacaacaagtgcctaaagt 447