Miyakogusa Predicted Gene
- Lj1g3v3254660.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3254660.1 Non Chatacterized Hit- tr|K3YJA2|K3YJA2_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si014321,43.14,1e-17,zf-met,NULL; seg,NULL;
coiled-coil,NULL,CUFF.30281.1
(678 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63665 similar to UniRef100_A7QTF1 Cluster: Chromosome... 1078 0.0
gnl|LJGI|AV767163 96 3e-19
>gnl|LJGI|TC63665 similar to UniRef100_A7QTF1 Cluster: Chromosome undetermined
scaffold_167, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_167,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (39%)
Length = 1125
Score = 1078 bits (544), Expect = 0.0
Identities = 544/544 (100%)
Strand = Plus / Plus
Query: 1 atgataaagaggagattctacaggcttgatcgtggcgataaggatgcctccgatgcgtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 atgataaagaggagattctacaggcttgatcgtggcgataaggatgcctccgatgcgtct 175
Query: 61 tcctcagaagaagatgattatgaacagaacaacgatgatgatgctggctcaacatcttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 tcctcagaagaagatgattatgaacagaacaacgatgatgatgctggctcaacatcttct 235
Query: 121 ggatatgaaagtgaggatagttctgtgaaagaggtggatgtcaattcagcaggtctgcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 ggatatgaaagtgaggatagttctgtgaaagaggtggatgtcaattcagcaggtctgcta 295
Query: 181 tctagtgatgatgatgctggaactatacgtgaaaagcaagtgcttattaacagggagctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 tctagtgatgatgatgctggaactatacgtgaaaagcaagtgcttattaacagggagctg 355
Query: 241 cctaataaacgttattctgaaaagtctaatgcctcagctatggctgaagagaaaccttta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 cctaataaacgttattctgaaaagtctaatgcctcagctatggctgaagagaaaccttta 415
Query: 301 cccactgaaatgacatcctatatcttacaatgcaaatcagtttttaaatgcaggatatgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 cccactgaaatgacatcctatatcttacaatgcaaatcagtttttaaatgcaggatatgt 475
Query: 361 cctcggattatctgtttgagtgaggacactttgcgcgatcatcttcagtcaaagagacat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 cctcggattatctgtttgagtgaggacactttgcgcgatcatcttcagtcaaagagacat 535
Query: 421 gctcgatctgaaaaactttataagcaaggtagactaaaggccatgctgaacattaatggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 gctcgatctgaaaaactttataagcaaggtagactaaaggccatgctgaacattaatggt 595
Query: 481 gaaattgagaatgatgaggactcagagacagagatccaaaccgaagatactgaggaaaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 gaaattgagaatgatgaggactcagagacagagatccaaaccgaagatactgaggaaaat 655
Query: 541 gtgc 544
||||
Sbjct: 656 gtgc 659
Score = 133 bits (67), Expect = 2e-30
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 612 tgacaaatcaaacacaaggaaaatgcggtcaaccaaaaggcaagccaagaaaagccgaaa 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 tgacaaatcaaacacaaggaaaatgcggtcaaccaaaaggcaagccaagaaaagccgaaa 786
Query: 672 agaatga 678
|||||||
Sbjct: 787 agaatga 793
>gnl|LJGI|AV767163
Length = 334
Score = 95.6 bits (48), Expect = 3e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 617 aatcaaacacaaggaaaatgcggtcaaccaaaaggcaagccaagaaaagccgaaaagaat 676
|||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 314 aatcaaacccaaggaaaatgcggtcatccaaaaggcaagccaaaaaaagccgaaaagaat 255