Miyakogusa Predicted Gene

Lj1g3v3254660.1
Show Alignment: 
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3254660.1 Non Chatacterized Hit- tr|K3YJA2|K3YJA2_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si014321,43.14,1e-17,zf-met,NULL; seg,NULL;
coiled-coil,NULL,CUFF.30281.1
         (678 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63665 similar to UniRef100_A7QTF1 Cluster: Chromosome...  1078   0.0  
gnl|LJGI|AV767163                                                      96   3e-19

>gnl|LJGI|TC63665 similar to UniRef100_A7QTF1 Cluster: Chromosome undetermined
           scaffold_167, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_167,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (39%)
          Length = 1125

 Score = 1078 bits (544), Expect = 0.0
 Identities = 544/544 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgataaagaggagattctacaggcttgatcgtggcgataaggatgcctccgatgcgtct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 atgataaagaggagattctacaggcttgatcgtggcgataaggatgcctccgatgcgtct 175

                                                                       
Query: 61  tcctcagaagaagatgattatgaacagaacaacgatgatgatgctggctcaacatcttct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 tcctcagaagaagatgattatgaacagaacaacgatgatgatgctggctcaacatcttct 235

                                                                       
Query: 121 ggatatgaaagtgaggatagttctgtgaaagaggtggatgtcaattcagcaggtctgcta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 ggatatgaaagtgaggatagttctgtgaaagaggtggatgtcaattcagcaggtctgcta 295

                                                                       
Query: 181 tctagtgatgatgatgctggaactatacgtgaaaagcaagtgcttattaacagggagctg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 tctagtgatgatgatgctggaactatacgtgaaaagcaagtgcttattaacagggagctg 355

                                                                       
Query: 241 cctaataaacgttattctgaaaagtctaatgcctcagctatggctgaagagaaaccttta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 cctaataaacgttattctgaaaagtctaatgcctcagctatggctgaagagaaaccttta 415

                                                                       
Query: 301 cccactgaaatgacatcctatatcttacaatgcaaatcagtttttaaatgcaggatatgt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 cccactgaaatgacatcctatatcttacaatgcaaatcagtttttaaatgcaggatatgt 475

                                                                       
Query: 361 cctcggattatctgtttgagtgaggacactttgcgcgatcatcttcagtcaaagagacat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 cctcggattatctgtttgagtgaggacactttgcgcgatcatcttcagtcaaagagacat 535

                                                                       
Query: 421 gctcgatctgaaaaactttataagcaaggtagactaaaggccatgctgaacattaatggt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 gctcgatctgaaaaactttataagcaaggtagactaaaggccatgctgaacattaatggt 595

                                                                       
Query: 481 gaaattgagaatgatgaggactcagagacagagatccaaaccgaagatactgaggaaaat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 gaaattgagaatgatgaggactcagagacagagatccaaaccgaagatactgaggaaaat 655

               
Query: 541 gtgc 544
           ||||
Sbjct: 656 gtgc 659



 Score =  133 bits (67), Expect = 2e-30
 Identities = 67/67 (100%)
 Strand = Plus / Plus

                                                                       
Query: 612 tgacaaatcaaacacaaggaaaatgcggtcaaccaaaaggcaagccaagaaaagccgaaa 671
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 tgacaaatcaaacacaaggaaaatgcggtcaaccaaaaggcaagccaagaaaagccgaaa 786

                  
Query: 672 agaatga 678
           |||||||
Sbjct: 787 agaatga 793


>gnl|LJGI|AV767163 
          Length = 334

 Score = 95.6 bits (48), Expect = 3e-19
 Identities = 57/60 (95%)
 Strand = Plus / Minus

                                                                       
Query: 617 aatcaaacacaaggaaaatgcggtcaaccaaaaggcaagccaagaaaagccgaaaagaat 676
           |||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 314 aatcaaacccaaggaaaatgcggtcatccaaaaggcaagccaaaaaaagccgaaaagaat 255