Miyakogusa Predicted Gene
- Lj1g3v3244570.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3244570.1 Non Chatacterized Hit- tr|I1JDM8|I1JDM8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.46586
PE,77.43,0,eIF-5_eIF-2B,Translation initiation factor IF2/IF5; W2,W2
domain; no description,Translation initiat,CUFF.30332.1
(1329 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59753 homologue to UniRef100_A7NV57 Cluster: Chromoso... 392 e-108
gnl|LJGI|FS337618 homologue to UniRef100_P48724 Cluster: Eukaryo... 299 2e-80
gnl|LJGI|TC65405 similar to UniRef100_P48724 Cluster: Eukaryotic... 230 2e-59
gnl|LJGI|DN652387 homologue to UniRef100_A7NV57 Cluster: Chromos... 96 7e-19
>gnl|LJGI|TC59753 homologue to UniRef100_A7NV57 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 740
Score = 392 bits (198), Expect = e-108
Identities = 222/230 (96%)
Strand = Plus / Plus
Query: 37 gatgccttctataggtataagatgcctagaatgattacaaaaattgagggtagaggtaat 96
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 504 gatgccttctataggtataagatgcctagaatgattaccaaaattgagggtagaggtaac 563
Query: 97 ggcatcaaaacaaatgttgtcaacatggttgatatagcaaaggcattggccaggccagcg 156
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 564 ggcatcaaaacaaatgttgtcaacatggttgatatagcaaaggcattggcgaggccagcg 623
Query: 157 gcttacacgacgaagtatttcggttgtgaacttggggctcagtcgaaatttgatgagaag 216
|||||||| || ||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 624 gcttacactaccaagtatttcggttgtgaacttggagcccagtcgaaatttgatgagaag 683
Query: 217 actggaacttctcatgtcaatggtgcacatgatactgcaaagcttgctgg 266
||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 684 actggaacttctcatgtcaatggtgcacatgatactgcaaaacttgctgg 733
>gnl|LJGI|FS337618 homologue to UniRef100_P48724 Cluster: Eukaryotic translation
initiation factor 5; n=1; Phaseolus vulgaris|Rep:
Eukaryotic translation initiation factor 5 - Phaseolus
vulgaris (Kidney bean) (French bean), partial (24%)
Length = 692
Score = 299 bits (151), Expect = 2e-80
Identities = 280/323 (86%)
Strand = Plus / Plus
Query: 1 atggccttgcagaatattggtgctgcaaacagtgatgatgccttctataggtataagatg 60
||||| || ||||| ||||| |||| |||||| |||||||||||||| ||||||||||||
Sbjct: 370 atggcgttacagaacattggcgctggaaacagcgatgatgccttctacaggtataagatg 429
Query: 61 cctagaatgattacaaaaattgagggtagaggtaatggcatcaaaacaaatgttgtcaac 120
|||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 430 cctagaatgattaccaaaattgagggtagaggtaatggcatcaagacaaatattgtcaat 489
Query: 121 atggttgatatagcaaaggcattggccaggccagcggcttacacgacgaagtatttcggt 180
||||||||||| || ||||| ||||| ||||| || || |||||||| ||||| || |||
Sbjct: 490 atggttgatattgccaaggcgttggcgaggccggccgcgtacacgaccaagtactttggt 549
Query: 181 tgtgaacttggggctcagtcgaaatttgatgagaagactggaacttctcatgtcaatggt 240
||||| ||||| |||||||| |||||||||||||| | ||| || |||||||| |||||
Sbjct: 550 tgtgagcttggagctcagtccaaatttgatgagaaaaatgggacatctcatgtgaatggg 609
Query: 241 gcacatgatactgcaaagcttgctggtcttcttgagaacttcattaagaaatatgtccaa 300
|||||||| ||||| || ||||||| |||| | ||||| ||||| ||||| ||||||||
Sbjct: 610 gcacatgaaactgcgaaacttgctgctcttttggagaatttcatcaagaagtatgtccag 669
Query: 301 tgctatggctgtggaaatcctga 323
|| ||||| |||||||| |||||
Sbjct: 670 tgttatggttgtggaaaccctga 692
>gnl|LJGI|TC65405 similar to UniRef100_P48724 Cluster: Eukaryotic translation
initiation factor 5; n=1; Phaseolus vulgaris|Rep:
Eukaryotic translation initiation factor 5 - Phaseolus
vulgaris (Kidney bean) (French bean), partial (44%)
Length = 982
Score = 230 bits (116), Expect = 2e-59
Identities = 353/432 (81%)
Strand = Plus / Plus
Query: 882 actggttggtgaagtgaaagcttatttgaagaaaggtgtttcagcaaaggaattactgtc 941
||||||||| ||||| ||||| ||||||||||||||| | | ||||| ||||| ||| |
Sbjct: 241 actggttggggaagtcaaagcagatttgaagaaaggtgctactgcaaaagaattgctgac 300
Query: 942 tcatttggcaacgatttctgtatctgctcaggaaaagatgagtgctttgtttgaagccct 1001
||| ||||||| || ||| ||||||||| ||||| ||||||||| ||| |||||||||
Sbjct: 301 ccatctggcaacacttcctgcatctgctcaagaaaaaatgagtgctctgtatgaagccct 360
Query: 1002 ttttgatggaattgagaaaggttttgcaaaagaaactatcaagaggaagagctaccttgc 1061
||||| || | ||||||||| || || |||| | | || ||||||||||||||||||||
Sbjct: 361 gtttgagggcactgagaaagggttcgcgaaagtagcaattaagaggaagagctaccttgc 420
Query: 1062 tgctgcggttgctgaggaagagggatcccagttgttactgcttcatgctatcgaggaatt 1121
|||||| ||| || |||| ||||| |||||| | |||| ||||| || ||||||||
Sbjct: 421 tgctgcagtttctcaggaggagggtatgcagttgccattgctgcatgcaattgaggaatt 480
Query: 1122 ttcttgcaagtctgcttccagtgctctgaaggaggttgccctgattctgaaaacactcta 1181
||| |||||||| |||||| ||| ||||||||||||||||| ||||||| | |||||
Sbjct: 481 ttcctgcaagtccacttccaatgcgttgaaggaggttgccctggttctgaaggcgctcta 540
Query: 1182 tgatgctgatgtgttggatgaagacaatatcgtgcagtggtatcaaaaagggctgaaagg 1241
||||||||||| ||||| ||||| | || || |||||||| || |||||||| |||||
Sbjct: 541 cgatgctgatgttttggaggaagagcacatagttcagtggtaccagaaagggctcaaagg 600
Query: 1242 tgatgacaagaactctgtgatttggaagaatgttaagcccttcatcgagtggcttcagac 1301
||| ||||| ||||| ||||||||||||||||||||| || | || ||||||||||
Sbjct: 601 cgataacaaggactctcagatttggaagaatgttaagccttttgttgactggcttcagag 660
Query: 1302 tgcggaatcaga 1313
||| || |||||
Sbjct: 661 tgcagagtcaga 672
Score = 159 bits (80), Expect = 5e-38
Identities = 110/120 (91%)
Strand = Plus / Plus
Query: 673 gatgtgcaatggctagctgatacatctgcagaggctgctcggcaacgtatccaagagcag 732
||||| || ||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 2 gatgttcagtggctagctgatacatcagcagaggctgctcgtaaacgtatccaagagcag 61
Query: 733 ttaagtgctgtgacagctgatatggtcatgctctccacaaatgaaacagaggagaagaaa 792
||||||||||| ||||||||||||||||||||| ||||||||||| ||||| || |||||
Sbjct: 62 ttaagtgctgtaacagctgatatggtcatgctcaccacaaatgaaccagagaaggagaaa 121
>gnl|LJGI|DN652387 homologue to UniRef100_A7NV57 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 221
Score = 95.6 bits (48), Expect = 7e-19
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 217 actggaacttctcatgtcaatggtgcacatgatactgcaaagcttgctggtcttcttgag 276
||||||||||||||||||||||||||||| ||||||||||| |||||||| || ||||||
Sbjct: 1 actggaacttctcatgtcaatggtgcacakgatactgcaaaacttgctggcctccttgag 60
Query: 277 aa 278
||
Sbjct: 61 aa 62