Miyakogusa Predicted Gene
- Lj1g3v3244490.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3244490.1 tr|G7KW42|G7KW42_MEDTR Metal ion binding protein
OS=Medicago truncatula GN=MTR_7g083060 PE=4 SV=1,85.03,0,HMA,Heavy
metal-associated domain, HMA; HMA, heavy metal-associated domain,Heavy
metal-associated do,CUFF.30252.1
(444 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61692 similar to UniRef100_A7P3I8 Cluster: Chromosome... 151 4e-36
gnl|LJGI|TC80592 similar to UniRef100_A7P3I8 Cluster: Chromosome... 117 6e-26
gnl|LJGI|TC69657 similar to UniRef100_A7P3I8 Cluster: Chromosome... 68 5e-11
>gnl|LJGI|TC61692 similar to UniRef100_A7P3I8 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 732
Score = 151 bits (76), Expect = 4e-36
Identities = 76/76 (100%)
Strand = Plus / Plus
Query: 74 agacagttgagatcaaagtgaaaatggactgcgatggatgtgaacgaagagtcagaaatg 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 agacagttgagatcaaagtgaaaatggactgcgatggatgtgaacgaagagtcagaaatg 535
Query: 134 cagtggctacaatgaa 149
||||||||||||||||
Sbjct: 536 cagtggctacaatgaa 551
Score = 149 bits (75), Expect = 2e-35
Identities = 75/75 (100%)
Strand = Plus / Plus
Query: 1 atgggtgttcttgattatctgttctccaacttttgcacttcacccagcacaaaaactaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgggtgttcttgattatctgttctccaacttttgcacttcacccagcacaaaaactaaa 120
Query: 61 tacaaagcaatgcag 75
|||||||||||||||
Sbjct: 121 tacaaagcaatgcag 135
>gnl|LJGI|TC80592 similar to UniRef100_A7P3I8 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (87%)
Length = 643
Score = 117 bits (59), Expect = 6e-26
Identities = 110/127 (86%)
Strand = Plus / Plus
Query: 68 caatgcagacagttgagatcaaagtgaaaatggactgcgatggatgtgaacgaagagtca 127
|||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||| |
Sbjct: 168 caatgcagacagttgaaatcaaagtgaaaatggactgtgatggatgtgaaagaagagtta 227
Query: 128 gaaatgcagtggctacaatgaaaggagtaaaatctgtggagataaatagaaagcaaagca 187
| ||| | || || |||||||| || | ||| |||||||| ||||||||||||||||
Sbjct: 228 ggaattcggttgcccacatgaaaggtgtgagatcagtggagatcaatagaaagcaaagca 287
Query: 188 aggtaac 194
|||||||
Sbjct: 288 aggtaac 294
>gnl|LJGI|TC69657 similar to UniRef100_A7P3I8 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (90%)
Length = 672
Score = 67.9 bits (34), Expect = 5e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 68 caatgcagacagttgagatcaaagtgaaaatggactgcgatggatgtgaacgaagagt 125
||||||||||||| || ||||| |||||||||||||| ||||| |||||| |||||||
Sbjct: 164 caatgcagacagtggaaatcaaggtgaaaatggactgtgatggctgtgaaagaagagt 221