Miyakogusa Predicted Gene

Lj1g3v3221300.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3221300.1 tr|A9T4N0|A9T4N0_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_88027
,37.8,2e-19,EF_HAND_2,EF-HAND 2; EF_HAND_1,EF-Hand 1, calcium-binding
site; EF_hand_5,NULL; no description,EF-ha,CUFF.30234.1
         (414 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63403 similar to UniRef100_A7PX07 Cluster: Chromosome...   654   0.0  

>gnl|LJGI|TC63403 similar to UniRef100_A7PX07 Cluster: Chromosome chr12 scaffold_36,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_36, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (96%)
          Length = 666

 Score =  654 bits (330), Expect = 0.0
 Identities = 381/398 (95%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagtgtagaaatcttggatggtgccaccattgtcaacttccttgaggatgaagaagca 60
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89  atgagtgtagaaatattggatggtgccaccattgtcaacttccttgaggatgaagaagca 148

                                                                       
Query: 61  tttgatatctcaatatgcaaccggttcgctctccttgacacaaacaaagacggtcgtctc 120
           |||||||||||  ||||| |||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 149 tttgatatctcggtatgcgaccggttcgctctccttgacacaaacaacgacggtcttctc 208

                                                                       
Query: 121 tcctataaagagatgttgaaggagctccagagcctgagggttctggaaacccactttggg 180
           |||||| | |||||| ||||||||||||||||||||||||||||||||||||||| ||| 
Sbjct: 209 tcctatgaggagatgctgaaggagctccagagcctgagggttctggaaacccactatggt 268

                                                                       
Query: 181 attgatgtcgagcctaaccctgatgagcttgctcgtgtttatgagtcattgttcatccaa 240
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 269 attgatgtcgagcctaaccctgatgagcttgctcgtgtttacgagtcattgttcatccaa 328

                                                                       
Query: 241 ttcgaccacaacttgaatggctcagttgatctagaagagttcaagatggaaactagggag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ttcgaccacaacttgaatggctcagttgatctagaagagttcaagatggaaactagggag 388

                                                                       
Query: 301 atgatgcttgccatggcagatggaatgggtttcttgccagttcagatggtccttgaagaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 atgatgcttgccatggcagatggaatgggtttcttgccagttcagatggtccttgaagaa 448

                                                 
Query: 361 gacagcattcttaagaaagcagttgagagggagtgcaa 398
           |||||||| || |||| ||| ||||| |||||||||||
Sbjct: 449 gacagcatcctgaagagagctgttgaaagggagtgcaa 486