Miyakogusa Predicted Gene

Lj1g3v3219210.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3219210.1 Non Chatacterized Hit- tr|B4FWV4|B4FWV4_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,33.95,2e-16,seg,NULL;
PROKAR_LIPOPROTEIN,NULL; coiled-coil,NULL,CUFF.30226.1
         (810 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO030664 weakly similar to UniRef100_A7NZ33 Cluster: Ch...  1310   0.0  
gnl|LJGI|GO037156 UniRef100_Q6CS49 Cluster: Similarity; n=1; Klu...   216   2e-55

>gnl|LJGI|GO030664 weakly similar to UniRef100_A7NZ33 Cluster: Chromosome chr6
           scaffold_3, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (40%)
          Length = 903

 Score = 1310 bits (661), Expect = 0.0
 Identities = 705/713 (98%), Gaps = 5/713 (0%)
 Strand = Plus / Minus

                                                                       
Query: 98  agaagaggataatcaacagagagattgaaaatgactatggtagccctgtgaaggagcttt 157
           ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 899 agaagaggataatcaacagagagat-gaaaatgactatggtagcc-tgtgaaggagcttt 842

                                                                       
Query: 158 tcaacatgttctgctggaagagaccatcatcgtcttctttgaggcaaaatggttttactc 217
            |||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 841 -caacatgt-ctgctggaagagaccatcatcatct-ctttgaggcaaaatggttttactc 785

                                                                       
Query: 218 cgcgagagctttgttcttcagtgagaattggtgaaaatcttgtttacaacccagaattgc 277
           | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 caccagagctttgttcttcagtgagaattggtgaaaatcttgtttacaacccagaattgc 725

                                                                       
Query: 278 aagctcagtcacaaactaacaagggttttcttttcaaaccctttggggaagatgggttgg 337
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 aagctcagtcacaaactaacaagggttttcttttcaaaccctttggggaagatgggttgg 665

                                                                       
Query: 338 aagaagaatacatgaggcaacagggtctctttggtcctccaaggttcttgttcccaataa 397
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 aagaagaatacatgaggcaacagggtctctttggtcctccaaggttcttgttcccaataa 605

                                                                       
Query: 398 ttgaagaatcaaaggaggatctagaatctcaggatagcaagtctagaggtagaagcttgg 457
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 ttgaagaatcaaaggaggatctagaatctcaggatagcaagtctagaggtagaagcttgg 545

                                                                       
Query: 458 gtgatttgctagttgtggagacaccatatttgacacctaatgcatctccaccatttttca 517
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gtgatttgctagttgtggagacaccatatttgacacctaatgcatctccaccatttttca 485

                                                                       
Query: 518 ctccacctttcactcctatcagcccctatagccagcatggattcaatcctctttttgaat 577
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ctccacctttcactcctatcagcccctatagccagcatggattcaatcctctttttgaat 425

                                                                       
Query: 578 cagcaactgatgcagagttcaacagaatgaagtcatcacctcctccaaaatttaagttct 637
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 cagcaactgatgcagagttcaacagaatgaagtcatcacctcctccaaaatttaagttct 365

                                                                       
Query: 638 tacaagaagcagaagagaagcttagaagaaaattacaagacaatgagggaaatggagatg 697
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tacaagaagcagaagagaagcttagaagaaaattacaagacaatgagggaaatggagatg 305

                                                                       
Query: 698 aggtttccatcacagtagttgttgacaagaaaagtgaaagggatgtgaatcaccaatctc 757
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 aggtttccatcacagtagttgttgacaagaaaagtgaaagggatgtgaatcaccaatctc 245

                                                                
Query: 758 atctacctcagtaccattcaagcacttcacaggtacttcccttaggttcttga 810
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 atctacctcagtaccattcaagcacttcacaggtacttcccttaggttcttga 192


>gnl|LJGI|GO037156 UniRef100_Q6CS49 Cluster: Similarity; n=1; Kluyveromyces
           lactis|Rep: Similarity - Kluyveromyces lactis (Yeast)
           (Candida sphaerica), partial (6%)
          Length = 603

 Score =  216 bits (109), Expect = 2e-55
 Identities = 121/125 (96%)
 Strand = Plus / Plus

                                                                       
Query: 151 gagcttttcaacatgttctgctggaagagaccatcatcgtcttctttgaggcaaaatggt 210
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 479 gagcttttcaacatgttctgctggaagagaccatcatcatcttctttgaggcaaaatggt 538

                                                                       
Query: 211 tttactccgcgagagctttgttcttcagtgagaattggtgaaaatcttgtttacaaccca 270
           |||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 539 tttactccaccagagctttgttcttcagtgagaattggtgaaaatcttgtttaccaccca 598

                
Query: 271 gaatt 275
           |||||
Sbjct: 599 gaatt 603