Miyakogusa Predicted Gene

Lj1g3v3218020.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3218020.1 Non Chatacterized Hit- tr|I1N543|I1N543_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,78.61,0,PENTATRICOPEPTIDE (PPR) REPEAT-CONTAINING PROTEIN,NULL;
FAMILY NOT NAMED,NULL; no description,Tetrat,CUFF.30205.1
         (2746 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67711 similar to UniRef100_A7QWH8 Cluster: Chromosome...    54   5e-06

>gnl|LJGI|TC67711 similar to UniRef100_A7QWH8 Cluster: Chromosome undetermined
            scaffold_203, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_203, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (31%)
          Length = 722

 Score = 54.0 bits (27), Expect = 5e-06
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                               
Query: 2320 gaacactatgcctgcatggttgatcttctaggccg 2354
            |||||||||| ||||||||||||||| ||||||||
Sbjct: 70   gaacactatggctgcatggttgatctactaggccg 104