Miyakogusa Predicted Gene

Lj1g3v3207810.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3207810.1 Non Chatacterized Hit- tr|D7TLY6|D7TLY6_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,39.13,0.00000000000003,F-box,F-box domain, cyclin-like; no
description,NULL; FBOX,F-box domain, cyclin-like; F-box
domain,F,CUFF.30187.1
         (1179 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP056291                                                     107   2e-22

>gnl|LJGI|BP056291 
          Length = 476

 Score =  107 bits (54), Expect = 2e-22
 Identities = 224/281 (79%)
 Strand = Plus / Minus

                                                                        
Query: 898  gatgccttattctgcttcttgaaactatgccctgccttggagcaactttttgtgacgatt 957
            ||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 470  gatgccttagtctccttcttgaaattatgccctgccttggagcaactttttgtgacaatt 411

                                                                        
Query: 958  gatcctgaaagttattggactgaaagcactaattcatgtttgatgcaaacaaccaaatgt 1017
            |||||| |||||| ||  |||  | |  |  ||||| | || |||||| || | |||| |
Sbjct: 410  gatcctaaaagtttttctactccacggtccnattcaggcttaatgcaagcagctaaatat 351

                                                                        
Query: 1018 gtagaattgaagcatctaaaactggtaaagttaatgggatttacatgtagaaaagatgaa 1077
              |||| || |||||||||||||| |||||||  |||| ||||||  |  |  |||||||
Sbjct: 350  acagaactggagcatctaaaactgataaagtttgtggggtttacaaatcaagtagatgaa 291

                                                                        
Query: 1078 atctcattggcaaaatgtttaagtcatctaatcaagggaaagcctccaaagataaacaca 1137
            |||||| |||| |||  ||| | | |  || ||||||||||||||||||||||| | |||
Sbjct: 290  atctcagtggcgaaaattttgattaaggtagtcaagggaaagcctccaaagatagagaca 231

                                                     
Query: 1138 tctgatgggaattgctgggatgcagagtttgtgcagtgatt 1178
            ||  |||||| ||  | |||||||| || | ||||||||||
Sbjct: 230  tcaaatgggagttatttggatgcagtgtatatgcagtgatt 190