Miyakogusa Predicted Gene

Lj1g3v3194570.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3194570.2 Non Chatacterized Hit- tr|Q015D3|Q015D3_OSTTA
Uncharacterized protein OS=Ostreococcus tauri
GN=Ot07g,47.31,2e-19,FAMILY NOT NAMED,NULL; no description,Mog1/PsbP,
alpha/beta/alpha sandwich; PsbP,Photosystem II PsbP,CUFF.30182.2
         (387 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64011 similar to UniRef100_A7PJ10 Cluster: Chromosome...   565   e-161

>gnl|LJGI|TC64011 similar to UniRef100_A7PJ10 Cluster: Chromosome chr13 scaffold_17,
           whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
           Chromosome chr13 scaffold_17, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (80%)
          Length = 822

 Score =  565 bits (285), Expect = e-161
 Identities = 288/289 (99%)
 Strand = Plus / Plus

                                                                       
Query: 99  tgggcctcctcaacaggttggagaaactctgataaaaagggttttggcccctccaaacca 158
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgggcctcctcaacaggttggagaaactctgataaaaagggttttggcccctccaaacca 504

                                                                       
Query: 159 gaaaacgaagataattgaagcaacagagcaagatgttgatgggaaaacatactatcgatt 218
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gaaaacgaagataattgaagcaacagagcaagatgttgatgggaaaacatactatcgatt 564

                                                                       
Query: 219 tgagtttattgctaaagctccaaactacactcggcatgctctcagcacagtctccgttag 278
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgagtttattgctcaagctccaaactacactcggcatgctctcagcacagtctccgttag 624

                                                                       
Query: 279 caatggtaaattttacaccctaaccacaggagcaaatgagagaagatgggacaagatgaa 338
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 caatggtaaattttacaccctaaccacaggagcaaatgagagaagatgggacaagatgaa 684

                                                            
Query: 339 agagagattgcagacagtcatagaatccttcaaaatttccaatgtttaa 387
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agagagattgcagacagtcatagaatccttcaaaatttccaatgtttaa 733



 Score =  192 bits (97), Expect = 1e-48
 Identities = 97/97 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggatatacatttatctaccctttcgggtggcaggaagtatcgattgagggtcaagata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 atggatatacatttatctaccctttcgggtggcaggaagtatcgattgagggtcaagata 362

                                                
Query: 61  aggtgttcaaagatgtcattgaaccgctggaaagcgt 97
           |||||||||||||||||||||||||||||||||||||
Sbjct: 363 aggtgttcaaagatgtcattgaaccgctggaaagcgt 399