Miyakogusa Predicted Gene

Lj1g3v3150000.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3150000.1 Non Chatacterized Hit- tr|I1N4Z0|I1N4Z0_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,92.74,0,IMPORTIN 7, 8
(IMP7, 8) (RAN-BINDING PROTEIN 7, 8),NULL; IMPORTIN-7, 8, 11,NULL;
coiled-coil,NULL; s,CUFF.30136.1
         (1452 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS348282 weakly similar to UniRef100_A7Q9N9 Cluster: Ch...    96   7e-19
gnl|LJGI|TC73998                                                       74   3e-12

>gnl|LJGI|FS348282 weakly similar to UniRef100_A7Q9N9 Cluster: Chromosome chr5
           scaffold_67, whole genome shotgun sequence; n=2; Vitis
           vinifera|Rep: Chromosome chr5 scaffold_67, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (6%)
          Length = 699

 Score = 95.6 bits (48), Expect = 7e-19
 Identities = 72/80 (90%)
 Strand = Plus / Minus

                                                                       
Query: 844 cgtgctaatttcaaaagggaacatgagaagaaagtgtgctgccttggtttaacatcatta 903
           ||||||||||||| || | ||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 674 cgtgctaatttcagaaagaaacatgagaggaaagtttgctgccttggtttaacatcatta 615

                               
Query: 904 ctggcactcccagctgatca 923
           ||  || |||||||||||||
Sbjct: 614 cttacagtcccagctgatca 595



 Score = 71.9 bits (36), Expect = 1e-11
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                        
Query: 1218 tgatgatgaagagttgcagtccccaattgacgaggtggatccttttattttctttgtgga 1277
            ||||||||||||||||||||||||| || | |||||| |||||||  |||||||||||||
Sbjct: 321  tgatgatgaagagttgcagtccccagttcaagaggtgaatcctttagttttctttgtgga 262


>gnl|LJGI|TC73998 
          Length = 713

 Score = 73.8 bits (37), Expect = 3e-12
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                                 
Query: 1379 atgctgagctgagacgagctgaaattgagaaggaaaaattagagaagtcatca 1431
            |||||||||||||| |||| || ||||| ||||||||||||||||||||||||
Sbjct: 1    atgctgagctgagaagagcagagattgaaaaggaaaaattagagaagtcatca 53