Miyakogusa Predicted Gene
- Lj1g3v3137680.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3137680.2 Non Chatacterized Hit- tr|I1KA84|I1KA84_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.36786
PE,80.65,0,seg,NULL; Multidrug resistance efflux transporter
EmrE,NULL; FAMILY NOT NAMED,NULL; EamA,Drug/metabo,CUFF.30107.2
(1110 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57890 similar to UniRef100_A7NVB2 Cluster: Chromosome... 123 2e-27
gnl|LJGI|TC62215 weakly similar to UniRef100_A7NVB2 Cluster: Chr... 101 9e-21
>gnl|LJGI|TC57890 similar to UniRef100_A7NVB2 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (55%)
Length = 1248
Score = 123 bits (62), Expect = 2e-27
Identities = 155/186 (83%)
Strand = Plus / Plus
Query: 757 caagggctggtgatgaaaataagaggccccgtatttgcaacagcctttaatcctctttgc 816
|||||| |||| ||||||| ||||| || || |||| ||| |||||||||||||||||
Sbjct: 765 caagggttggtaatgaaaagcagaggtccagtgtttgttacatcctttaatcctctttgc 824
Query: 817 atgatcattgttgctggtttgggctcccttattttaggagaacagctccatcttggaagt 876
| |||||| ||||| | |||||| ||| | |||||||||||||| ||| | || ||||||
Sbjct: 825 acgatcatcgttgcagctttgggttccttcattttaggagaacatctctacctgggaagt 884
Query: 877 atcattggtggcatcatcatcgcacttggtctttactcagttgtgtggggaaaagcaaag 936
|| ||||| |||||||||||||| | ||||||||||| || || |||||||||| |||
Sbjct: 885 attattggaagcatcatcatcgcagtgggtctttactctgtggtttggggaaaagggaag 944
Query: 937 gactat 942
||||||
Sbjct: 945 gactat 950
Score = 52.0 bits (26), Expect = 8e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 527 tgggttgtgtggccttgtcttccttctacattttgcagtcaataac 572
|||||||| |||| | |||||| ||||||||||||||||| |||||
Sbjct: 535 tgggttgtttggcttggtcttctttctacattttgcagtccataac 580
>gnl|LJGI|TC62215 weakly similar to UniRef100_A7NVB2 Cluster: Chromosome chr18
scaffold_1, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (54%)
Length = 782
Score = 101 bits (51), Expect = 9e-21
Identities = 213/267 (79%)
Strand = Plus / Plus
Query: 7 gggttgcaatttggcatggctggaaattacatcttcggcaaggatattcttaaccatggg 66
|||||||||||||| |||||||||| ||| | ||| ||| || | ||| || ||||||
Sbjct: 91 gggttgcaatttgggatggctggaacatacgtgttcagcatggccagtctgaatcatggg 150
Query: 67 atgagtcgttttgtgttcattgtttatcgcaatgccatggctaccgttgccatagctcct 126
|||||||| || |||||| |||| || ||||||| ||| ||| | ||||| | |||||
Sbjct: 151 atgagtcgcttggtgttcgttgtgtaccgcaatgtcatcgctgcagttgcgctcgctccg 210
Query: 127 tttgcattttttctcgaaaggaaaagtaggcccaagatgacactatcagtcttcctccag 186
|||||||| || | |||||||| | |||||| ||||||||||| || || ||| | ||
Sbjct: 211 tttgcattgttctttgaaaggaagactaggccgaagatgacactctctgtgttcgtacaa 270
Query: 187 ataatggttctgggatttctagagccagtttttaatcaaaacttcacttacttggggatg 246
||| | | ||| |||||||| |||||||| || ||||| |||||||| ||||||||||
Sbjct: 271 atactagctcttggatttcttgagccagtaattgatcaaggcttcactttcttggggatg 330
Query: 247 aagtacacctccgcatcattcgcatct 273
| |||||||| || ||||| ||||||
Sbjct: 331 caatacacctcagcttcatttgcatct 357
Score = 52.0 bits (26), Expect = 8e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 527 tgggttgtgtggccttgtcttccttctacattttgcagtcaataac 572
|||||||| |||| | |||||| ||||||||||||||||| |||||
Sbjct: 617 tgggttgtttggcttggtcttctttctacattttgcagtccataac 662