Miyakogusa Predicted Gene

Lj1g3v3116580.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3116580.1 CUFF.30095.1
         (336 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS338232 similar to UniRef100_A6R6M9 Cluster: Predicted...   283   3e-76
gnl|LJGI|GO010813 similar to UniRef100_Q09085 Cluster: Hydroxypr...    80   1e-14

>gnl|LJGI|FS338232 similar to UniRef100_A6R6M9 Cluster: Predicted protein; n=1;
           Ajellomyces capsulatus NAm1|Rep: Predicted protein -
           Ajellomyces capsulata (strain NAm1) (Histoplasma
           capsulatum), partial (9%)
          Length = 705

 Score =  283 bits (143), Expect = 3e-76
 Identities = 161/167 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgacactaaaaccccttattgtgtgccccatcatttctccctcgaccttctttgatctc 60
           ||||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 539 atgacactaaagccccttattgtgtgccccatcatttctcccttgatcttctttgatctc 598

                                                                       
Query: 61  ttcacctgcaagtgtgccactggggccaactccgaccaaccacctcggcggctgccggag 120
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 599 ttcacctgcaagtgtgccactgtggccaactccgaccaaccacctcggcggctgccggag 658

                                                          
Query: 121 gatttcagggcagtggtcacttcctctccctcatcccttcctgggcg 167
           ||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 659 gatttcagggcagtggtcacttcctttccctcatcccttcccgggcg 705


>gnl|LJGI|GO010813 similar to UniRef100_Q09085 Cluster: Hydroxyproline-rich
           glycoprotein; n=1; Phaseolus vulgaris|Rep:
           Hydroxyproline-rich glycoprotein - Phaseolus vulgaris
           (Kidney bean) (French bean), partial (6%)
          Length = 556

 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 63/69 (91%), Gaps = 5/69 (7%)
 Strand = Plus / Minus

                                                                       
Query: 270 ggacaaaagaacattgaattgt--aatacatcattgcatctggaattttttgctgtaaat 327
           ||||||||||||||||||||||  |||||||   |||||||| |||||||||||||||||
Sbjct: 556 ggacaaaagaacattgaattgtgtaatacat---tgcatctgaaattttttgctgtaaat 500

                    
Query: 328 ttacaataa 336
           |||||||||
Sbjct: 499 ttacaataa 491