Miyakogusa Predicted Gene
- Lj1g3v3116540.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3116540.1 Non Chatacterized Hit- tr|I1N4W7|I1N4W7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2432
PE=,80.96,0,coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; seg,NULL,CUFF.30111.1
(3342 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC593477 similar to UniRef100_A7PAM9 Cluster: Chromosom... 615 e-175
gnl|LJGI|TC74701 similar to UniRef100_A7PAM9 Cluster: Chromosome... 96 2e-18
gnl|LJGI|BP044806 weakly similar to UniRef100_Q010M7 Cluster: Pr... 62 2e-08
gnl|LJGI|TC71558 similar to UniRef100_A7P315 Cluster: Chromosome... 60 9e-08
>gnl|LJGI|DC593477 similar to UniRef100_A7PAM9 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 560
Score = 615 bits (310), Expect = e-175
Identities = 316/318 (99%)
Strand = Plus / Plus
Query: 1 atgtttacgccgcagagggtgtggcagggttggtccctcacgcccagcaagagcggggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 atgtttacgccgcagagggtgtggcagggttggtccctcacgcccagcaagagcggggct 302
Query: 61 cgtgcgggaactgggtccggttcgggccgcgatttgggtccggaatcgggcgatggggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 cgtgcgggaactgggtccggttcgggccgcgatttgggtccggaatcgggcgatggggct 362
Query: 121 ggttcgaaggggaaaggtgtcgcgtttgtggagaatggaggaaacctggatcgggaggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ggttcgaaggggaaaggtgtcgcgtttgtggagaatggaggaaacctggatcgggaggtt 422
Query: 181 ttggttgagagaatttccatgcttgagaaggagctctatgactaccaatacaatatgggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ttggttgagagaatttccatgcttgagaaggagctctatgactaccaatacaatatgggg 482
Query: 241 cttctcttaattgagaaaaaagagtggaattctatgtattctgagctaagtcaaaattta 300
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 483 cttctcttaattgagaaaaaagagggggattctatgtattctgagctaagtcaaaattta 542
Query: 301 gtagaagtgaaggatgct 318
||||||||||||||||||
Sbjct: 543 gtagaagtgaaggatgct 560
>gnl|LJGI|TC74701 similar to UniRef100_A7PAM9 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 610
Score = 95.6 bits (48), Expect = 2e-18
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 3279 tggaagcatagatcttgaggagtctcataaagtggtgggtacccaggatggttatggtga 3338
|||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||
Sbjct: 1 tggaagcatagatcttgaggagtctcattcactggtgggtacccaggatgtttatggtga 60
Query: 3339 tacc 3342
||||
Sbjct: 61 tacc 64
>gnl|LJGI|BP044806 weakly similar to UniRef100_Q010M7 Cluster: Predicted membrane
protein; n=1; Ostreococcus tauri|Rep: Predicted membrane
protein -, partial (1%)
Length = 538
Score = 61.9 bits (31), Expect = 2e-08
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 3308 aagtggtgggtacccaggatggttatggtga 3338
|||||||||||||||||||||||||||||||
Sbjct: 102 aagtggtgggtacccaggatggttatggtga 72
>gnl|LJGI|TC71558 similar to UniRef100_A7P315 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 487
Score = 60.0 bits (30), Expect = 9e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 211 gagctctatgactaccaatacaatatggggcttctcttaattgagaaaaaagagtgga 268
||||||| ||||||||||||||| ||||| || ||||| |||||||| ||||| ||||
Sbjct: 406 gagctctttgactaccaatacaacatgggcctcctcttgattgagaagaaagaatgga 463