Miyakogusa Predicted Gene
- Lj1g3v3103940.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3103940.1 tr|G7KSU9|G7KSU9_MEDTR Protein YIF1B-B
OS=Medicago truncatula GN=MTR_7g020800 PE=4 SV=1,85.39,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; YIP1 INTERACTING FACTOR HOMOLOG (YIF1
PROTEIN),Hrf1; YIF1,Hrf1,CUFF.30054.1
(804 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79139 similar to UniRef100_A7QM95 Cluster: Chromosome... 922 0.0
gnl|LJGI|TC79574 similar to UniRef100_A7QM95 Cluster: Chromosome... 674 0.0
gnl|LJGI|TC60503 similar to UniRef100_A7QM95 Cluster: Chromosome... 541 e-153
>gnl|LJGI|TC79139 similar to UniRef100_A7QM95 Cluster: Chromosome chr5 scaffold_124,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_124, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (50%)
Length = 498
Score = 922 bits (465), Expect = 0.0
Identities = 468/469 (99%)
Strand = Plus / Plus
Query: 1 atgtataacaatgtaaggccgcaactcgggatgcctcaatttcagccgcaacccccgaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30 atgtataacaatgtaaggccgcaactcgggatgcctcaatttcagccgcaacccccgaca 89
Query: 61 agctcgcaacctaatgtgcttgggagtgcatttaataccgctggggcaggactcattcga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 agctcgcaacctaatgtgcttgggagtgcatttaataccgctggggcaggactcattcga 149
Query: 121 ggtggattgggtgcatatggagaaaaaatatttgggtcaagctctgattacgttcaaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 ggtggattgggtgcatatggagaaaaaatatttgggtcaagctctgattacgttcaaagt 209
Query: 181 aacataagtcggtatttctctgacccacagtattacttccaagtgaatggccactatgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 aacataagtcggtatttctctgacccacagtattacttccaagtgaatggccactatgtt 269
Query: 241 aagaacaaattgaaggtggttttgttcccattcctgcaccggggtcattggactagaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 aagaacaaattgaaggtggttttgttcccattcctgcaccggggtcattggactagaatt 329
Query: 301 actgaacccgtgggaggcagactgtcttataaaccacccatttatgacataaatgcaccc 360
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 actgaacccgtgggaagcagactgtcttataaaccacccatttatgacataaatgcaccc 389
Query: 361 gacctgtacattccaatgatggcatttggtacctacgttattcttgctggcatctcattg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gacctgtacattccaatgatggcatttggtacctacgttattcttgctggcatctcattg 449
Query: 421 ggttttcatggaaagtttagccctgaagctctaaactggttattcatca 469
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ggttttcatggaaagtttagccctgaagctctaaactggttattcatca 498
>gnl|LJGI|TC79574 similar to UniRef100_A7QM95 Cluster: Chromosome chr5 scaffold_124,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_124, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (43%)
Length = 962
Score = 674 bits (340), Expect = 0.0
Identities = 340/340 (100%)
Strand = Plus / Plus
Query: 465 catcaagggattgattggttgggttatgcaaactgcactacttaaagggacattggtttt 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 catcaagggattgattggttgggttatgcaaactgcactacttaaagggacattggtttt 60
Query: 525 attgggcagtggggaagcagctatattggacatggtatcatatgctgggtatgctttccc 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attgggcagtggggaagcagctatattggacatggtatcatatgctgggtatgctttccc 120
Query: 585 tggcctgtgtttggctgttctgggaagaattttagggggttactcctactacattttgat 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tggcctgtgtttggctgttctgggaagaattttagggggttactcctactacattttgat 180
Query: 645 gccatggacctgcttatgcatgggagtattcttggtgaaaacaatgaagagagtcctttt 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gccatggacctgcttatgcatgggagtattcttggtgaaaacaatgaagagagtcctttt 240
Query: 705 cgcagaggtcaggagttatgattcaagcaaacaccactatgtcttgctctttattgctct 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgcagaggtcaggagttatgattcaagcaaacaccactatgtcttgctctttattgctct 300
Query: 765 ggctcagttcctattcttcacatggctcggaaatatatag 804
||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggctcagttcctattcttcacatggctcggaaatatatag 340
>gnl|LJGI|TC60503 similar to UniRef100_A7QM95 Cluster: Chromosome chr5 scaffold_124,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_124, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (96%)
Length = 1137
Score = 541 bits (273), Expect = e-153
Identities = 582/685 (84%)
Strand = Plus / Plus
Query: 107 caggactcattcgaggtggattgggtgcatatggagaaaaaatatttgggtcaagctctg 166
||||||| |||||||||||| ||||||| ||||||| ||| || || || || |||||||
Sbjct: 219 caggacttattcgaggtggactgggtgcctatggaggaaagattttgggatcgagctctg 278
Query: 167 attacgttcaaagtaacataagtcggtatttctctgacccacagtattacttccaagtga 226
| || || ||||| || ||||| |||||||||||||| || || || ||||| |||||||
Sbjct: 279 agtatgtccaaagcaatataagccggtatttctctgatccccaatactactttcaagtga 338
Query: 227 atggccactatgttaagaacaaattgaaggtggttttgttcccattcctgcaccggggtc 286
||| ||| |||||||||||||||||||||||||||||||| ||||| || ||| |||| |
Sbjct: 339 atgaccattatgttaagaacaaattgaaggtggttttgtttccatttctacacaggggcc 398
Query: 287 attggactagaattactgaacccgtgggaggcagactgtcttataaaccacccatttatg 346
| ||||||||||||||||| || || || || || |||| ||||||||||| |||||||
Sbjct: 399 actggactagaattactgagccagtcgggggtaggttgtcctataaaccacctatttatg 458
Query: 347 acataaatgcacccgacctgtacattccaatgatggcatttggtacctacgttattcttg 406
||||||||||||| ||||| ||||||||| |||||||||| |||||||||||| ||||||
Sbjct: 459 acataaatgcaccagacctatacattccattgatggcattcggtacctacgttgttcttg 518
Query: 407 ctggcatctcattgggttttcatggaaagtttagccctgaagctctaaactggttattca 466
||||| ||||||||||| |||||||||||||||| || || ||| | |||| ||||||||
Sbjct: 519 ctggcctctcattgggtcttcatggaaagtttagtccagaggctttgaacttgttattca 578
Query: 467 tcaagggattgattggttgggttatgcaaactgcactacttaaagggacattggttttat 526
||||||||||| |||||||| |||||||| | |||| ||||| ||| ||| |||
Sbjct: 579 tcaagggattgcttggttggtttatgcaagcctcactgcttaagatgactttgctttcgc 638
Query: 527 tgggcagtggggaagcagctatattggacatggtatcatatgctgggtatgctttccctg 586
|||||||||||||||| | | ||||||| || |||||||||| ||| ||||| |||
Sbjct: 639 tgggcagtggggaagctccactgctggacatcatagcatatgctggatatactttcactg 698
Query: 587 gcctgtgtttggctgttctgggaagaattttagggggttactcctactacattttgatgc 646
|| | |||||||||||||| |||||||| | ||| |||||||||||| |||||||||
Sbjct: 699 gcatatgtttggctgttcttggaagaataattttgggctactcctactactttttgatgc 758
Query: 647 catggacctgcttatgcatgggagtattcttggtgaaaacaatgaagagagtccttttcg 706
|||||||||| |||||||||| |||||| ||||||||||||||||||||||| ||||| |
Sbjct: 759 catggacctgtttatgcatggcagtatttttggtgaaaacaatgaagagagttctttttg 818
Query: 707 cagaggtcaggagttatgattcaagcaaacaccactatgtcttgctctttattgctctgg 766
| ||||| |||| |||||| || ||||||||||||||| |||||||||| |||||| |||
Sbjct: 819 cggaggttaggacttatgactccagcaaacaccactatctcttgctcttcattgctttgg 878
Query: 767 ctcagttcctattcttcacatggct 791
||||||| ||| |||||||||||
Sbjct: 879 tccagttcccattgttcacatggct 903