Miyakogusa Predicted Gene

Lj1g3v3103820.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3103820.1 tr|G7K4K1|G7K4K1_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_5g0,23.15,3e-18,PPR,Pentatricopeptide repeat; PPR:
pentatricopeptide repeat domain,Pentatricopeptide repeat;
SUBFAMI,CUFF.30043.1
         (1914 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW616959                                                     767   0.0  

>gnl|LJGI|BW616959 
          Length = 485

 Score =  767 bits (387), Expect = 0.0
 Identities = 390/391 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagacatcaatggcgtctcctccaccttcttctccgcgctcacaaccgcactcccaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  atgagacatcaatggcgtctcctccaccttcttctccgcgctcacaaccgcactcccaac 154

                                                                       
Query: 61  cacactcgccacctccaccaactccgcaccctctcttccctccctcaccgtcccaccccc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 cacactcgccacctccaccaactccgcaccctctcttccctccctcaccgtcccaccccc 214

                                                                       
Query: 121 aatttcacattccctgcaaaccctagcctccgccacttctcctccgaccccgttctcgaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 aatttcacattccctgcaaaccctagcctccgccacttctcctccgaccccgttctcgaa 274

                                                                       
Query: 181 caacccgatcccgatcacgccatcatcgccgacttgttctccaagcccgccgccgatccc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 caacccgatcccgatcacgccatcatcgccgacttgttctccaagcccgccgccgatccc 334

                                                                       
Query: 241 tccgtcgtcaagagccagctcgattcgaatcgcgtctcgatcaaccacgatgcggttatt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tccgtcgtcaagagccagctcgattcgaatcgcgtctcgatcaaccacgatgcggttatt 394

                                                                       
Query: 301 gccgaattgttgaagctcgaatcgagccctgaagttgctcagagattcttccggtgggtc 360
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gccgaattgttgaagctcaaatcgagccctgaagttgctcagagattcttccggtgggtc 454

                                          
Query: 361 ctcgagactcaccctgagatgctgagctcca 391
           |||||||||||||||||||||||||||||||
Sbjct: 455 ctcgagactcaccctgagatgctgagctcca 485