Miyakogusa Predicted Gene

Lj1g3v3090470.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3090470.1 Non Chatacterized Hit- tr|Q9SN06|Q9SN06_ARATH
Putative uncharacterized protein F3A4.200
OS=Arabidops,32.67,1e-18,DUF247,Protein of unknown function DUF247,
plant; FAMILY NOT NAMED,NULL; coiled-coil,NULL;
seg,NULL,gene.g34109.t1.1
         (1378 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC60874 weakly similar to UniRef100_A7QAK6 Cluster: Chr...   101   1e-20

>gnl|LJGI|TC60874 weakly similar to UniRef100_A7QAK6 Cluster: Chromosome undetermined
           scaffold_71, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_71, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (36%)
          Length = 779

 Score =  101 bits (51), Expect = 1e-20
 Identities = 246/311 (79%)
 Strand = Plus / Plus

                                                                       
Query: 103 gtgtccatcttcaatgtgcctaagccccttatggctagtaatccagaatcttatactcct 162
           |||||||||||||| ||||| ||||  |||||||| ||| ||||||| ||||||   || 
Sbjct: 193 gtgtccatcttcaacgtgccgaagcttcttatggcaagtgatccagattcttatgtcccg 252

                                                                       
Query: 163 cagcaagttgccattggaccttaccattattggcgtcaagaactgtatgagatggagagg 222
           || ||| |||| || || || ||||| ||||||||||  ||  ||||||||||| | |||
Sbjct: 253 caacaaattgcaatcggtccgtaccactattggcgtccggagttgtatgagatgcaaagg 312

                                                                       
Query: 223 tacaagctttcagcagcaaagagattccaaaaacaacttcaaagcctcaagttacaacac 282
           ||||||||| ||||||| || || ||||| ||||| || ||| ||| ||||||| |  ||
Sbjct: 313 tacaagcttgcagcagctaaaaggttccagaaacagctacaaggccacaagttagacaac 372

                                                                       
Query: 283 attgttgaccaattgataaggttagagctcaggattagatcatgctaccataagtacttg 342
            |||||  |||||||  ||  || ||||  |||||  ||  ||||||||| |||| ||||
Sbjct: 373 cttgtttgccaattggaaaacttggagcagaggatccgaggatgctaccacaagttcttg 432

                                                                       
Query: 343 aatttcaatgccgaaacattggcgtggatgatggctgttgatgcctcatttttgctagag 402
            |||||||   ||||||||||| |||||||||||| ||||| ||||  || || || |||
Sbjct: 433 gatttcaactgcgaaacattggtgtggatgatggcggttgacgccttgttcttacttgag 492

                      
Query: 403 tttcttcaagt 413
           || ||||||||
Sbjct: 493 ttccttcaagt 503