Miyakogusa Predicted Gene
- Lj1g3v3078240.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3078240.1 Non Chatacterized Hit- tr|B7ZZP8|B7ZZP8_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,60.27,1e-17,no
description,Helix-loop-helix domain; HLH,Helix-loop-helix domain;
helix loop helix domain,Helix-l,CUFF.30001.1
(1026 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62782 similar to UniRef100_A2Q626 Cluster: Helix-loop... 2026 0.0
gnl|LJGI|GO030599 similar to UniRef100_A2Q626 Cluster: Helix-loo... 733 0.0
>gnl|LJGI|TC62782 similar to UniRef100_A2Q626 Cluster: Helix-loop-helix DNA-binding;
n=1; Medicago truncatula|Rep: Helix-loop-helix
DNA-binding - Medicago truncatula (Barrel medic), partial
(71%)
Length = 1303
Score = 2026 bits (1022), Expect = 0.0
Identities = 1025/1026 (99%)
Strand = Plus / Plus
Query: 1 atggctaggtctgccaaaggccatcaagatgaattggacgacgacaacgacgaagacctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 atggctaggtctgccaaaggccatcaagatgaattggacgacgacaacgacgaagacctc 143
Query: 61 ttcactgaaaacacctcttcctctctcaacaaagagaaggtggatgaacccactaagggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 ttcactgaaaacacctcttcctctctcaacaaagagaaggtggatgaacccactaagggg 203
Query: 121 aagagggtgaaccctcatcgttccaagcattcagagactgagcagcgtcgaaggatcaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 aagagggtgaaccctcatcgttccaagcattcagagactgagcagcgtcgaaggatcaaa 263
Query: 181 attaacgaaagatttcaggttctgaaagatctcatacctcaaaatgatcagaaaagagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 attaacgaaagatttcaggttctgaaagatctcatacctcaaaatgatcagaaaagagat 323
Query: 241 aaggcctccttgttgttggaggttattcagtatgttcagttcctacaggaaaagctacaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaggcctccttgttgttggaggttattcagtatgttcagttcctacaggaaaagctacaa 383
Query: 301 atttatgaacagtctcatgaaggatggaatcaggagccgacgaaattaattccatggaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 atttatgaacagtctcatgaaggatggaatcaggagccgacgaaattaattccatggaga 443
Query: 361 aatcatcatgggcctgctgaacatactacagatccttctcaagctattcaaaacgggtct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aatcatcatgggcctgctgaacatactacagatccttctcaagctattcaaaacgggtct 503
Query: 421 gttattgcgaaaaataatgatatctcttcattactgccccaaaatgtacagaacccaata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gttattgcgaaaaataatgatatctcttcattactgccccaaaatgtacagaacccaata 563
Query: 481 gagtctgacttctcaacgacaactattcagaagggccacaccccttgttcagctactgaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gagtctgacttctcaacgacaactattcagaagggccacaccccttgttcagctactgaa 623
Query: 541 aaagttcccatgacgaagcaaatgcgattggacgtgtttgatccagttgttaacagtggt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aaagttcccatgacgaagcaaatgcgattggacgtgtttgatccagttgttaacagtggt 683
Query: 601 ttggtgacccagcatgtgctggaacctctgtctaatgcgggcataccttcccataccgag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ttggtgacccagcatgtgctggaacctctgtctaatgcgggcataccttcccataccgag 743
Query: 661 cctcaagtatggcttagtaaaccaaataaggacaaatatattgttccagataatacattg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 cctcaagtatggcttagtaaaccaaataaggacaaatatattgttccagataatacattg 803
Query: 721 aaggaacaggaggagctgacaattgaaagtggatcagatagcatttccaatgcctattct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 aaggaacaggaggagctgacaattgaaagtggatcagatagcatttccaatgcctattct 863
Query: 781 cagagaatattagatactctcacacaagcactgcagtgctcaggggtggatttgtctcag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 cagagaatattagatactctcacacaagcactgcagtgctcaggggtggatttgtctcag 923
Query: 841 gccagtgtctcagtgcaaattgatgtcggtagacgatcaaatagcgggttgaccccctct 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 gccagtgtctcagtgcaaattgatgtcggtagacgatcaaatagcgggttgaccccctct 983
Query: 901 acatatagctcaaagggtcatcaaaaccagtttttgaacaatcaaggaatggcatgttca 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 984 acatatagctcaaagggtcatcaaaaccagtttttgaacaatcaaggaatggcatgttca 1043
Query: 961 ggaggtgattattgcagtgaggattctgaacaaagtcagaagaggctcaggcgagaagca 1020
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1044 ggaggtgattattgcagtgaggattttgaacaaagtcagaagaggctcaggcgagaagca 1103
Query: 1021 agctag 1026
||||||
Sbjct: 1104 agctag 1109
>gnl|LJGI|GO030599 similar to UniRef100_A2Q626 Cluster: Helix-loop-helix DNA-binding;
n=1; Medicago truncatula|Rep: Helix-loop-helix
DNA-binding - Medicago truncatula (Barrel medic),
partial (45%)
Length = 835
Score = 733 bits (370), Expect = 0.0
Identities = 383/386 (99%), Gaps = 1/386 (0%)
Strand = Plus / Minus
Query: 253 ttgttggaggttattcagtatgttcagttcctacaggaaaagctacaaatttatgaacag 312
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 835 ttgttggaggttattcagtatgttcagttc-tacaggaaaagctacaaatttatgaacag 777
Query: 313 tctcatgaaggatggaatcaggagccgacgaaattaattccatggagaaatcatcatggg 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 tctcatgaaggatggaatcaggagccgacgaaattaattccatggagaaatcatcatggg 717
Query: 373 cctgctgaacatactacagatccttctcaagctattcaaaacgggtctgttattgcgaaa 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 cctgctgaacatactacagatccttctcaagctattcaaaacgggtctgttattgcgaaa 657
Query: 433 aataatgatatctcttcattactgccccaaaatgtacagaacccaatagagtctgacttc 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 aataatgatatctcttcattactgccccaaaatgtacagaacccaatagagtctgacttc 597
Query: 493 tcaacgacaactattcagaagggccacaccccttgttcagctactgaaaaagttcccatg 552
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 596 tcaacgacaactattcagaagggccacaccccttgttcagctactgaaaaagtccccatg 537
Query: 553 acgaagcaaatgcgattggacgtgtttgatccagttgttaacagtggtttggtgacccag 612
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 gcgaagcaaatgcgattggacgtgtttgatccagttgttaacagtggtttggtgacccag 477
Query: 613 catgtgctggaacctctgtctaatgc 638
||||||||||||||||||||||||||
Sbjct: 476 catgtgctggaacctctgtctaatgc 451
Score = 579 bits (292), Expect = e-164
Identities = 292/292 (100%)
Strand = Plus / Minus
Query: 735 gctgacaattgaaagtggatcagatagcatttccaatgcctattctcagagaatattaga 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 gctgacaattgaaagtggatcagatagcatttccaatgcctattctcagagaatattaga 393
Query: 795 tactctcacacaagcactgcagtgctcaggggtggatttgtctcaggccagtgtctcagt 854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tactctcacacaagcactgcagtgctcaggggtggatttgtctcaggccagtgtctcagt 333
Query: 855 gcaaattgatgtcggtagacgatcaaatagcgggttgaccccctctacatatagctcaaa 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gcaaattgatgtcggtagacgatcaaatagcgggttgaccccctctacatatagctcaaa 273
Query: 915 gggtcatcaaaaccagtttttgaacaatcaaggaatggcatgttcaggaggtgattattg 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gggtcatcaaaaccagtttttgaacaatcaaggaatggcatgttcaggaggtgattattg 213
Query: 975 cagtgaggattctgaacaaagtcagaagaggctcaggcgagaagcaagctag 1026
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 cagtgaggattctgaacaaagtcagaagaggctcaggcgagaagcaagctag 161