Miyakogusa Predicted Gene
- Lj1g3v3063910.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3063910.1 CUFF.29984.1
(1080 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67355 similar to UniRef100_Q2HSE9 Cluster: Pollen Ole... 1645 0.0
gnl|LJGI|TC63042 similar to UniRef100_Q2HSE9 Cluster: Pollen Ole... 256 3e-67
gnl|LJGI|TC70289 similar to UniRef100_Q2HSE9 Cluster: Pollen Ole... 155 7e-37
gnl|LJGI|TC77602 similar to UniRef100_Q2HSE9 Cluster: Pollen Ole... 84 2e-15
gnl|LJGI|TC70476 homologue to UniRef100_Q2HSE9 Cluster: Pollen O... 80 3e-14
>gnl|LJGI|TC67355 similar to UniRef100_Q2HSE9 Cluster: Pollen Ole e 1 allergen and
extensin; n=1; Medicago truncatula|Rep: Pollen Ole e 1
allergen and extensin - Medicago truncatula (Barrel
medic), partial (49%)
Length = 1213
Score = 1645 bits (830), Expect = 0.0
Identities = 836/838 (99%)
Strand = Plus / Plus
Query: 31 agtctcacatttggtaatcctactgaggctatccatgacaagaagcctccctctgctgtt 90
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 agtctcacatttggtaatcctactgaggctatccatgacaagaagcctccctctgctgtt 62
Query: 91 gtggttggcactgtctactgtgacacgtgttttcaacaggatttctccatgggcagccat 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 gtggttggcactgtctactgtgacacgtgttttcaacaggatttctccatgggcagccat 122
Query: 151 ttcatttcaggtgcatcagttgctgtggaatgcaaagatggagatggtagttcaaattca 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ttcatttcaggtgcatcagttgctgtggaatgcaaagatggagatggtagttcaaattca 182
Query: 211 agcttcaagaaagaagtgaagacagatgagcatgggaaattcagagtgcaccttccattc 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 agcttcaagaaagaagtgaagacagatgagcatgggaaattcagagtgcaccttccattc 242
Query: 271 tcagtgagcaaacatgtaaagagaatcaagaggtgcagtgtgaaattgataagtagcagt 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tcagtgagcaaacatgtaaagagaatcaagaggtgcagtgtgaaattgataagtagcagt 302
Query: 331 gagccttattgtgctgtggcctcagcagctacttcttcttcacttcacctcaagtccaga 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gagccttattgtgctgtggcctcagcagctacttcttcttcacttcacctcaagtccaga 362
Query: 391 aagcaaggactacacatattctcagcagggtttttctcattcaagccacttaaacagcca 450
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 363 aagcaaggactacacatattctcagcagggtttttcccattcaagccacttaaacagcca 422
Query: 451 acactttgtaaccaaaaaccaagggttcaaaagggggcagattttgtgataaaatcattt 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 acactttgtaaccaaaaaccaagggttcaaaagggggcagattttgtgataaaatcattt 482
Query: 511 cctccaaatatagacccttcatttccacctccacttcaggatccaaacacacctggtggt 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 cctccaaatatagacccttcatttccacctccacttcaggatccaaacacacctggtggt 542
Query: 571 gttccttttcttcctcccaatactcttcctggattgcctgggcttccacaacttccagga 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 gttccttttcttcctcccaatactcttcctggattgcctgggcttccacaacttccagga 602
Query: 631 ctccctcctctgccaccccttccaggaataccaataccagggtcacccccaaagctgtca 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 ctccctcctctgccaccccttccaggaataccaataccagggtcacccccaaagctgtca 662
Query: 691 aaacaggccagcccagggcacatgaccaaaacttcagacaaaaatgagccttcagatata 750
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 aaacaggccagcccagggtacatgaccaaaacttcagacaaaaatgagccttcagatata 722
Query: 751 aaagttgttcaccctgaaaccttcatcttccctcctaatccacttcagccacctattgtt 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 aaagttgttcaccctgaaaccttcatcttccctcctaatccacttcagccacctattgtt 782
Query: 811 cccaacccacttcagccacctattgtccccaacccacttcagccacctccccttgttc 868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 cccaacccacttcagccacctattgtccccaacccacttcagccacctccccttgttc 840
Score = 252 bits (127), Expect = 4e-66
Identities = 127/127 (100%)
Strand = Plus / Plus
Query: 954 gcctccaccatcaggaccatcaccattttttccattcccaccagtaccaggttttactcc 1013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 926 gcctccaccatcaggaccatcaccattttttccattcccaccagtaccaggttttactcc 985
Query: 1014 accttcaccaccaccagtttctccctttcctttccttccattgttccctcctcctggctc 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 986 accttcaccaccaccagtttctccctttcctttccttccattgttccctcctcctggctc 1045
Query: 1074 acctcct 1080
|||||||
Sbjct: 1046 acctcct 1052
Score = 89.7 bits (45), Expect = 3e-17
Identities = 65/71 (91%), Gaps = 3/71 (4%)
Strand = Plus / Plus
Query: 790 ccacttcagccacctattgttcccaacccacttcagccaccta---ttgtccccaaccca 846
|||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||
Sbjct: 789 ccacttcagccacctattgtccccaacccacttcagccacctccccttgttcccaaccca 848
Query: 847 cttcagccacc 857
|||||||||||
Sbjct: 849 cttcagccacc 859
>gnl|LJGI|TC63042 similar to UniRef100_Q2HSE9 Cluster: Pollen Ole e 1 allergen and
extensin; n=1; Medicago truncatula|Rep: Pollen Ole e 1
allergen and extensin - Medicago truncatula (Barrel
medic), partial (33%)
Length = 776
Score = 256 bits (129), Expect = 3e-67
Identities = 304/362 (83%), Gaps = 9/362 (2%)
Strand = Plus / Plus
Query: 79 ccctctgctgttgtggttggcactgtctactgtgacacgtgttttcaacaggatttctcc 138
||||| |||||||||||||||||||||||||||||||| |||| |||||||| |||||||
Sbjct: 115 ccctcagctgttgtggttggcactgtctactgtgacacatgttctcaacaggctttctcc 174
Query: 139 atgggcagccatttcatttcaggtgcatcagttgctgtggaatgcaaagatggagatggt 198
||||||||||| |||||||||||||||||||| ||||| || ||||| || |||
Sbjct: 175 atgggcagccacttcatttcaggtgcatcagtagctgtagagtgcaa------agttggg 228
Query: 199 agttcaaattcaagcttcaagaaagaagtgaagacagatgagcatgggaaattcagagtg 258
| |||||| |||| ||||||||||||||||||||| ||||||||||| |||||| ||||
Sbjct: 229 aattcaaaaccaagattcaagaaagaagtgaagacaaatgagcatggggaattcaaagtg 288
Query: 259 caccttccattctcagtgagcaaacatgtaaagagaatcaagaggtgcagtgtgaaattg 318
|| | || ||| ||||| |||||||| | |||||||||| | || | | | || |||
Sbjct: 289 cagttgcctttccatgtgaggaaacatgtgaggagaatcaagggatgtacttttaagttg 348
Query: 319 ataagtagcagtgagccttattgtgctgtggcctcagcagcta---cttcttcttcactt 375
||||||| ||||||||| | ||||||||||||||||| |||| |||||||||||||
Sbjct: 349 ttaagtagtagtgagcctcactgtgctgtggcctcagctgctagttcttcttcttcactg 408
Query: 376 cacctcaagtccagaaagcaaggactacacatattctcagcagggtttttctcattcaag 435
|||||||| |||||||| ||| ||||||||||||||| || |||||||||||||||
Sbjct: 409 agtctcaagtcaagaaagcagggagaacacatattctcagctggatttttctcattcaag 468
Query: 436 cc 437
||
Sbjct: 469 cc 470
>gnl|LJGI|TC70289 similar to UniRef100_Q2HSE9 Cluster: Pollen Ole e 1 allergen and
extensin; n=1; Medicago truncatula|Rep: Pollen Ole e 1
allergen and extensin - Medicago truncatula (Barrel
medic), partial (40%)
Length = 1058
Score = 155 bits (78), Expect = 7e-37
Identities = 241/295 (81%), Gaps = 9/295 (3%)
Strand = Plus / Plus
Query: 146 gccatttcatttcaggtgcatcagttgctgtggaatgcaaagatggagatggtagttcaa 205
|||| |||||||||||||||||||| ||||| || ||||||| ||| || ||||
Sbjct: 1 gccacttcatttcaggtgcatcagtagctgtagagtgcaaagttgggaat------tcaa 54
Query: 206 attcaagcttcaagaaagaagtgaagacagatgagcatgggaaattcagagtgcaccttc 265
| |||| ||||||||||||||||||||| ||||||||||| |||||| |||||| | |
Sbjct: 55 aaccaagattcaagaaagaagtgaagacaaatgagcatggggaattcaaagtgcagttgc 114
Query: 266 cattctcagtgagcaaacatgtaaagagaatcaagaggtgcagtgtgaaattgataagta 325
| ||| ||||| |||||||| | |||||||||| | || | | | || ||| ||||||
Sbjct: 115 ctttccatgtgaggaaacatgtgaggagaatcaagggatgtacttttaagttgttaagta 174
Query: 326 gcagtgagccttattgtgctgtggcctcagcagcta---cttcttcttcacttcacctca 382
| ||||||||| | ||||||||||||||||| |||| ||||||||||||| ||||
Sbjct: 175 gtagtgagcctcactgtgctgtggcctcagctgctagttcttcttcttcactgagtctca 234
Query: 383 agtccagaaagcaaggactacacatattctcagcagggtttttctcattcaagcc 437
|||| |||||||| ||| ||||||||||||||| || |||||||||||||||||
Sbjct: 235 agtcaagaaagcagggagaacacatattctcagctggatttttctcattcaagcc 289
>gnl|LJGI|TC77602 similar to UniRef100_Q2HSE9 Cluster: Pollen Ole e 1 allergen and
extensin; n=1; Medicago truncatula|Rep: Pollen Ole e 1
allergen and extensin - Medicago truncatula (Barrel
medic), partial (8%)
Length = 528
Score = 83.8 bits (42), Expect = 2e-15
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 91 gtggttggcactgtctactgtgacacgtgttttcaacaggatttctccatgggcagccat 150
|||||||| ||||| ||||||| ||| |||||||||||||||||||||||||| |||||
Sbjct: 125 gtggttggaactgtgtactgtggcacatgttttcaacaggatttctccatgggaagccac 66
Query: 151 ttcatttcag 160
|||| |||||
Sbjct: 65 ttcacttcag 56
>gnl|LJGI|TC70476 homologue to UniRef100_Q2HSE9 Cluster: Pollen Ole e 1 allergen and
extensin; n=1; Medicago truncatula|Rep: Pollen Ole e 1
allergen and extensin - Medicago truncatula (Barrel
medic), partial (7%)
Length = 782
Score = 79.8 bits (40), Expect = 3e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 91 gtggttggcactgtctactgtgacacgtgttttcaacaggatttctccatgggcagccat 150
|||||||| ||||| ||||||| ||| |||||||||||||||||||||||||| |||||
Sbjct: 68 gtggttggaactgtgtactgtggcacatgttttcaacaggatttctccatgggaagccac 9
Query: 151 ttca 154
||||
Sbjct: 8 ttca 5