Miyakogusa Predicted Gene

Lj1g3v3053790.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3053790.1 tr|G7KR16|G7KR16_MEDTR MADS-box protein
OS=Medicago truncatula GN=MTR_7g016630 PE=3 SV=1,74.9,0,seg,NULL;
SRF-TF,Transcription factor, MADS-box; K-box,Transcription factor,
K-box; MADSDOMAIN,Trans,CUFF.29968.1
         (765 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO026211 similar to UniRef100_A7PAE3 Cluster: Chromosom...   125   4e-28
gnl|LJGI|TC76874 UniRef100_Q533S8 Cluster: MADS box protein AP1a...    78   9e-14
gnl|LJGI|NP7225997 GB|AY770396.1|AAX13297.1 MADS box protein AP1...    72   6e-12

>gnl|LJGI|GO026211 similar to UniRef100_A7PAE3 Cluster: Chromosome chr14 scaffold_9,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr14 scaffold_9, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (51%)
          Length = 545

 Score =  125 bits (63), Expect = 4e-28
 Identities = 338/429 (78%), Gaps = 3/429 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggaagaggtagggttcagctgaaacggatcgagaacaagaccagtcttcaagtaaca 60
           ||||| ||||| ||||||||| |||| | |||||||||||| || ||||  ||||| || 
Sbjct: 103 atggggagaggaagggttcagttgaagcagatcgagaacaaaactagtcggcaagtgacg 162

                                                                       
Query: 61  ttttcaaaacggagaacgggacttctcaagaaagcaaatgaaatctctgtgctttgtgat 120
           ||||||||  |||||| ||| || |  ||||||||  |||||||||||||||| ||||||
Sbjct: 163 ttttcaaagaggagaatggggctgcgaaagaaagcccatgaaatctctgtgctctgtgat 222

                                                                       
Query: 121 gctcaggttgctttgatcatcttctcctccaaaggcaaactttttgagtattcttccgaa 180
           ||||| || || ||| |  |||||  | ||||||| | ||||| ||||| ||| || |||
Sbjct: 223 gctcaagtagcattgcttgtcttcaacaccaaaggaagactttatgagttttcatctgaa 282

                                                                       
Query: 181 cccagtgtggaagacattctggaacgatatgagaggtataaccatacag---aatgtgct 237
            ||||  | ||| || |  ||||||||||||||||  ||| |||  |||   ||  || |
Sbjct: 283 tccagcatcgaaaacgtgttggaacgatatgagagacatacccaagcagtgcaacttgtt 342

                                                                       
Query: 238 ggaactgatcatgaaacacagggaaactggtctttcgaatacatgaagctcactgctaaa 297
           ||| ||||| | |||  || | |||||||||| || |||| | | |||||||| | || |
Sbjct: 343 ggagctgataaagaacaaccgagaaactggtccttggaatgcttcaagctcaccggtaga 402

                                                                       
Query: 298 gttcaagtcttggagaggaacataaggaactttgtgggacaagatttggatcccttgagt 357
           ||| ||||||| |||| || |||||||||| | | |||||| ||| ||||||||||||  
Sbjct: 403 gttgaagtcttagagaagagcataaggaacatcgcgggacatgatctggatcccttgaac 462

                                                                       
Query: 358 actaaagtgcttcagagtttggagcaacagcttgacacatctctaaagcgcatccgaaca 417
              | || ||||||| |||||||||| |||||||||||| |||||| |||||||||||| 
Sbjct: 463 ttgagagagcttcagggtttggagcatcagcttgacacagctctaaggcgcatccgaact 522

                    
Query: 418 agaaagaac 426
           |||||||||
Sbjct: 523 agaaagaac 531


>gnl|LJGI|TC76874 UniRef100_Q533S8 Cluster: MADS box protein AP1a; n=1; Lotus
           japonicus|Rep: MADS box protein AP1a - Lotus japonicus,
           complete
          Length = 1382

 Score = 77.8 bits (39), Expect = 9e-14
 Identities = 120/147 (81%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggaagaggtagggttcagctgaaacggatcgagaacaagaccagtcttcaagtaaca 60
           |||||||| ||||| |||||||||||  |||| |||||||||| || ||  || ||||| 
Sbjct: 291 atgggaaggggtagagttcagctgaagaggatagagaacaagatcaatcggcaggtaact 350

                                                                       
Query: 61  ttttcaaaacggagaacgggacttctcaagaaagcaaatgaaatctctgtgctttgtgat 120
           || || ||| ||||| | || ||||||||||||||  |||| |||||||| || || |||
Sbjct: 351 ttctccaaaaggagagctgggcttctcaagaaagctcatgagatctctgttctctgcgat 410

                                      
Query: 121 gctcaggttgctttgatcatcttctcc 147
           ||| |||| ||||||||  ||||||||
Sbjct: 411 gctgaggtcgctttgattgtcttctcc 437


>gnl|LJGI|NP7225997 GB|AY770396.1|AAX13297.1 MADS box protein AP1b;LjAP1b; A function
           protein; includes MADS, I, K, and C domains;
           AP1/SQUA-like
          Length = 1122

 Score = 71.9 bits (36), Expect = 6e-12
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                       
Query: 88  aagaaagcaaatgaaatctctgtgctttgtgatgctcaggttgctttgatcatcttctcc 147
           ||||||||  |||| ||||||||||| ||||||||| |||||||||||||  ||||||||
Sbjct: 167 aagaaagctcatgagatctctgtgctatgtgatgctgaggttgctttgattgtcttctcc 226

                                   
Query: 148 tccaaaggcaaactttttgagtat 171
             |||||| || || |||||||||
Sbjct: 227 cacaaaggaaagctctttgagtat 250