Miyakogusa Predicted Gene

Lj1g3v3053780.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3053780.1 CUFF.29967.1
         (327 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS344601 similar to UniRef100_Q40552 Cluster: Pistil ex...   424   e-118

>gnl|LJGI|FS344601 similar to UniRef100_Q40552 Cluster: Pistil extensin like protein;
           n=1; Nicotiana tabacum|Rep: Pistil extensin like protein
           - Nicotiana tabacum (Common tobacco), partial (7%)
          Length = 667

 Score =  424 bits (214), Expect = e-118
 Identities = 214/214 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgtgtcaaagaggggcggtggaggctgcatcgtggccggagcgtggcgtggcaggaaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 atgtgtcaaagaggggcggtggaggctgcatcgtggccggagcgtggcgtggcaggaaga 323

                                                                       
Query: 61  gaccgtgagtgggtgagcgagaaaggaggaagagagcgatcggaagaggaggaagacagt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gaccgtgagtgggtgagcgagaaaggaggaagagagcgatcggaagaggaggaagacagt 263

                                                                       
Query: 121 gagtgggtgagcgagaaatcaaatctactcctttgcaagcttcaaggctttgaagctatg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gagtgggtgagcgagaaatcaaatctactcctttgcaagcttcaaggctttgaagctatg 203

                                             
Query: 181 aaacatgggctgtggggggcggatcaacgctcta 214
           ||||||||||||||||||||||||||||||||||
Sbjct: 202 aaacatgggctgtggggggcggatcaacgctcta 169



 Score = 54.0 bits (27), Expect = 5e-07
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                      
Query: 301 ggacttagagacgtggaccagaggtga 327
           |||||||||||||||||||||||||||
Sbjct: 113 ggacttagagacgtggaccagaggtga 87