Miyakogusa Predicted Gene
- Lj1g3v3053750.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3053750.2 tr|F6KSN1|F6KSN1_FRAAN MADS-1 OS=Fragaria
ananassa PE=2 SV=1,53.93,4e-19, ,CUFF.29966.2
(267 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO011170 similar to UniRef100_Q56NI4 Cluster: MADS box ... 529 e-150
gnl|LJGI|TC75219 similar to UniRef100_Q56NI4 Cluster: MADS box p... 529 e-150
gnl|LJGI|TC72723 homologue to UniRef100_Q3Y4G8 Cluster: MADS-box... 280 4e-75
gnl|LJGI|TC63015 similar to UniRef100_Q3Y4G8 Cluster: MADS-box p... 86 1e-16
>gnl|LJGI|GO011170 similar to UniRef100_Q56NI4 Cluster: MADS box protein M6; n=1;
Pisum sativum|Rep: MADS box protein M6 - Pisum sativum
(Garden pea), partial (74%)
Length = 698
Score = 529 bits (267), Expect = e-150
Identities = 267/267 (100%)
Strand = Plus / Plus
Query: 1 atgctggaccagttgtctgatcttcaaaataaggagcagatgttggtagaagcaaacaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atgctggaccagttgtctgatcttcaaaataaggagcagatgttggtagaagcaaacaga 384
Query: 61 tccttgtcagtgaagctggatgatatcaattcaagaaatcactacaggcaatcatgggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tccttgtcagtgaagctggatgatatcaattcaagaaatcactacaggcaatcatgggat 444
Query: 121 caagctggtgatcaaagcatgcagtatggtggttcacaaaatgctcactctcagggcttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 caagctggtgatcaaagcatgcagtatggtggttcacaaaatgctcactctcagggcttc 504
Query: 181 ttccagccattggaatgcaaccccacattgcagattggttctgactataggtacaatggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttccagccattggaatgcaaccccacattgcagattggttctgactataggtacaatggt 564
Query: 241 gtggcttcagatcagatggctgcaaca 267
|||||||||||||||||||||||||||
Sbjct: 565 gtggcttcagatcagatggctgcaaca 591
>gnl|LJGI|TC75219 similar to UniRef100_Q56NI4 Cluster: MADS box protein M6; n=1; Pisum
sativum|Rep: MADS box protein M6 - Pisum sativum (Garden
pea), complete
Length = 1276
Score = 529 bits (267), Expect = e-150
Identities = 267/267 (100%)
Strand = Plus / Plus
Query: 1 atgctggaccagttgtctgatcttcaaaataaggagcagatgttggtagaagcaaacaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 atgctggaccagttgtctgatcttcaaaataaggagcagatgttggtagaagcaaacaga 804
Query: 61 tccttgtcagtgaagctggatgatatcaattcaagaaatcactacaggcaatcatgggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tccttgtcagtgaagctggatgatatcaattcaagaaatcactacaggcaatcatgggat 864
Query: 121 caagctggtgatcaaagcatgcagtatggtggttcacaaaatgctcactctcagggcttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 caagctggtgatcaaagcatgcagtatggtggttcacaaaatgctcactctcagggcttc 924
Query: 181 ttccagccattggaatgcaaccccacattgcagattggttctgactataggtacaatggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 925 ttccagccattggaatgcaaccccacattgcagattggttctgactataggtacaatggt 984
Query: 241 gtggcttcagatcagatggctgcaaca 267
|||||||||||||||||||||||||||
Sbjct: 985 gtggcttcagatcagatggctgcaaca 1011
>gnl|LJGI|TC72723 homologue to UniRef100_Q3Y4G8 Cluster: MADS-box protein; n=1;
Glycine max|Rep: MADS-box protein - Glycine max
(Soybean), partial (22%)
Length = 573
Score = 280 bits (141), Expect = 4e-75
Identities = 144/145 (99%)
Strand = Plus / Plus
Query: 74 agctggatgatatcaattcaagaaatcactacaggcaatcatgggatcaagctggtgatc 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18 agctggatgatatcaattcaagaaatcactacaggcaatcatgggatcaagctggtgatc 77
Query: 134 aaagcatgcagtatggtggttcacaaaatgctcactctcagggcttcttccagccattgg 193
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 gaagcatgcagtatggtggttcacaaaatgctcactctcagggcttcttccagccattgg 137
Query: 194 aatgcaaccccacattgcagattgg 218
|||||||||||||||||||||||||
Sbjct: 138 aatgcaaccccacattgcagattgg 162
Score = 99.6 bits (50), Expect = 8e-21
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 218 gttctgactataggtacaatggtgtggcttcagatcagatggctgcaaca 267
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gttctgactataggtacaatggtgtggcttcagatcagatggctgcaaca 318
>gnl|LJGI|TC63015 similar to UniRef100_Q3Y4G8 Cluster: MADS-box protein; n=1; Glycine
max|Rep: MADS-box protein - Glycine max (Soybean),
partial (64%)
Length = 681
Score = 85.7 bits (43), Expect = 1e-16
Identities = 203/255 (79%), Gaps = 6/255 (2%)
Strand = Plus / Plus
Query: 1 atgctggaccagttgtctgatcttcaaaataaggagcagatgttggtagaagcaaacaga 60
|||| ||||||||| |||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 193 atgccggaccagttagctgatcttcaaaataaggagcacatgttaatagaagcaaacaga 252
Query: 61 tccttgtcagtgaagctggatgatatcaattcaagaaatcactacaggcaatcatgggat 120
| ||| ||||| |||| || ||||| ||||| || || || |||||| |||||||
Sbjct: 253 gctttgaacctgaagttggaagaaatcaactcaagcaaccattataggcaaacatggga- 311
Query: 121 caagctggtgatcaaagcatgcagtatggtggttcacaaaatgctcactctcagggcttc 180
||||||||||||||||||| |||||| || |||||| ||||| |||||
Sbjct: 312 --agctggtgatcaaagcatggcatatggtaac---cagaatgcttcttctcaaagcttc 366
Query: 181 ttccagccattggaatgcaaccccacattgcagattggttctgactataggtacaatggt 240
||||| || ||||| ||||| |||||||| ||||| ||| |||| || ||||||| | |
Sbjct: 367 ttccaacctttggagtgcaatcccacattacagataggtactgattacaggtacagtcct 426
Query: 241 gtggcttcagatcag 255
|| ||||||||||||
Sbjct: 427 gtagcttcagatcag 441