Miyakogusa Predicted Gene
- Lj1g3v3029350.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3029350.1 tr|F0RHZ2|F0RHZ2_CELLC Short-chain
dehydrogenase/reductase SDR (Precursor) OS=Cellulophaga lytica
(s,30.65,0.09,seg,NULL,CUFF.29939.1
(471 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP030108 UniRef100_Q88HQ8 Cluster: YeeE/YedE family pro... 389 e-107
gnl|LJGI|TC65766 similar to UniRef100_A7QUL0 Cluster: Chromosome... 86 2e-16
gnl|LJGI|FS321687 homologue to UniRef100_A7P3V4 Cluster: Chromos... 74 9e-13
gnl|LJGI|FS340202 similar to UniRef100_A2RVK7 Cluster: At4g27490... 74 9e-13
gnl|LJGI|TC64685 similar to UniRef100_Q5SND1 Cluster: Fertility ... 72 3e-12
gnl|LJGI|TC64455 similar to UniRef100_A7P5A9 Cluster: Chromosome... 54 8e-07
gnl|LJGI|AV777256 52 3e-06
gnl|LJGI|TC61359 similar to UniRef100_A7QEQ6 Cluster: Chromosome... 52 3e-06
>gnl|LJGI|BP030108 UniRef100_Q88HQ8 Cluster: YeeE/YedE family protein; n=1;
Pseudomonas putida KT2440|Rep: YeeE/YedE family protein
- Pseudomonas putida (strain KT2440), partial (8%)
Length = 534
Score = 389 bits (196), Expect = e-107
Identities = 199/200 (99%)
Strand = Plus / Plus
Query: 1 atgcttcaacaatggcgatcttcaggttctcaacgcaatagtcaacaacggcaaggcgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atgcttcaacaatggcgatcttcaggttctcaacgcaatagtcaacaacggcaaggcgaa 324
Query: 61 caacataacacctaccttcttcccattacgcatcaccctctttccgttgccctctcacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 caacataacacctaccttcttcccattacgcatcaccctctttccgttgccctctcacca 384
Query: 121 cgaccctctccaccgttgaagctctctcagtccgccccaacgccgtcgtttatgcgccta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cgaccctctccaccgttgaagctctctcagtccgccccaacgccgtcgtttatgcgccta 444
Query: 181 cgccgatttggggatttcga 200
|||||||| |||||||||||
Sbjct: 445 cgccgattgggggatttcga 464
>gnl|LJGI|TC65766 similar to UniRef100_A7QUL0 Cluster: Chromosome chr10 scaffold_179,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_179, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 750
Score = 85.7 bits (43), Expect = 2e-16
Identities = 53/55 (96%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 1 atgcttcaacaatggcgatcttcaggtt-ctcaacgcaatagtcaacaacggcaa 54
|||||||||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 90 atgcttcaacaatggcgatcttcaggttcctcaacgcaatagtcaacaacagcaa 144
>gnl|LJGI|FS321687 homologue to UniRef100_A7P3V4 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 726
Score = 73.8 bits (37), Expect = 9e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 380 tgagaaattccagaaacccaggggtggctaagcagggtgaagtcacccatgtgcctc 436
|||||||||||| ||| ||||||||| |||||||||| |||||||||| ||||||||
Sbjct: 276 tgagaaattccaaaaaaccaggggtgactaagcagggggaagtcacccctgtgcctc 332
>gnl|LJGI|FS340202 similar to UniRef100_A2RVK7 Cluster: At4g27490; n=2; Arabidopsis
thaliana|Rep: At4g27490 - Arabidopsis thaliana, partial
(6%)
Length = 634
Score = 73.8 bits (37), Expect = 9e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 380 tgagaaattccagaaacccaggggtggctaagcagggtgaagtcacccatgtgcctc 436
|||||||||||| ||| ||||||||| |||||||||| |||||||||| ||||||||
Sbjct: 489 tgagaaattccaaaaaaccaggggtgactaagcagggggaagtcacccctgtgcctc 545
>gnl|LJGI|TC64685 similar to UniRef100_Q5SND1 Cluster: Fertility restorer-like; n=1;
Oryza sativa Japonica Group|Rep: Fertility restorer-like
- Oryza sativa subsp. japonica (Rice), partial (6%)
Length = 711
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 380 tgagaaattccagaaacccaggggtggctaagcagggtgaagtcacccatgtgcct 435
|||||||||||| ||| ||||||||| |||||||||| |||||||||| |||||||
Sbjct: 331 tgagaaattccaaaaaaccaggggtgactaagcagggggaagtcacccctgtgcct 386
>gnl|LJGI|TC64455 similar to UniRef100_A7P5A9 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 897
Score = 54.0 bits (27), Expect = 8e-07
Identities = 49/55 (89%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 382 agaaattccagaaacccaggggtggctaagcagggtgaagtcacccatgtgcctc 436
|||||| ||| ||| ||||||||| ||||| |||| |||||||||||||||||||
Sbjct: 411 agaaatcccaaaaagccaggggtgactaag-agggggaagtcacccatgtgcctc 358
>gnl|LJGI|AV777256
Length = 390
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 375 gttgttgagaaattccagaaacccaggggtggctaagcaggg 416
||||||||||||||| | ||| ||||||||| ||||||||||
Sbjct: 148 gttgttgagaaattctaaaaagccaggggtgactaagcaggg 189
>gnl|LJGI|TC61359 similar to UniRef100_A7QEQ6 Cluster: Chromosome chr16 scaffold_86,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_86, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 873
Score = 52.0 bits (26), Expect = 3e-06
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 380 tgagaaattccagaaacccaggggtggctaagcagggtg-aagtcacccatgtgcctc 436
||||||||||| ||| ||||||||| |||||||||| | ||||||||| ||||||||
Sbjct: 314 tgagaaattcccaaaagccaggggtgactaagcagggggtaagtcacccctgtgcctc 371