Miyakogusa Predicted Gene
- Lj1g3v3028300.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3028300.1 Non Chatacterized Hit- tr|F4Q4B9|F4Q4B9_DICFS
Putative uncharacterized protein OS=Dictyostelium
fasc,40.71,3e-19,KOW,KOW; no description,Ribosomal protein L24,
SH3-like; MITOCHONDRIAL RIBOSOMAL PROTEIN L24,Ribosom,CUFF.29937.1
(483 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66957 similar to UniRef100_A7PUD1 Cluster: Chromosome... 957 0.0
gnl|LJGI|TC64213 similar to UniRef100_A7PUD1 Cluster: Chromosome... 759 0.0
gnl|LJGI|TC63605 similar to UniRef100_A7PUD1 Cluster: Chromosome... 751 0.0
gnl|LJGI|BW600286 similar to UniRef100_A7PUD1 Cluster: Chromosom... 274 5e-73
gnl|LJGI|FS325057 homologue to UniRef100_A7PUD1 Cluster: Chromos... 131 4e-30
gnl|LJGI|TC63866 homologue to UniRef100_A7PUD1 Cluster: Chromoso... 131 4e-30
>gnl|LJGI|TC66957 similar to UniRef100_A7PUD1 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 946
Score = 957 bits (483), Expect = 0.0
Identities = 483/483 (100%)
Strand = Plus / Plus
Query: 1 atgggttggaaagcagctgagaaactcattaggaactggaaaattgtcagaggggacaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 atgggttggaaagcagctgagaaactcattaggaactggaaaattgtcagaggggacaat 204
Query: 61 gttatgattataagaggcaaagataagggtgagactggccttattaagcgtgtcattcgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gttatgattataagaggcaaagataagggtgagactggccttattaagcgtgtcattcgc 264
Query: 121 tcgcagaatcgtgtcattgttgagggtaaaaatctggtaaagaagcatatcaagcaaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcgcagaatcgtgtcattgttgagggtaaaaatctggtaaagaagcatatcaagcaaggg 324
Query: 181 caaggtcatgaagggggcatctttacagttgaagccccaattcatgcctccaatgtgcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 caaggtcatgaagggggcatctttacagttgaagccccaattcatgcctccaatgtgcaa 384
Query: 241 gttcgtgacccagtgacggggaatccttgcaagattgggattaaatatcttgaagatgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gttcgtgacccagtgacggggaatccttgcaagattgggattaaatatcttgaagatgga 444
Query: 301 actagagtcagagtatccagaggaataggagcatctggctctataatccctcgtccggag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 actagagtcagagtatccagaggaataggagcatctggctctataatccctcgtccggag 504
Query: 361 atcttgaagatacgaactaccgcaagaccgtcagttcttggtcccagagatactccaatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atcttgaagatacgaactaccgcaagaccgtcagttcttggtcccagagatactccaatg 564
Query: 421 gatcttgtggtagagaagacatatgatgctaaaacaggaaggggcatgcctgaactttaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gatcttgtggtagagaagacatatgatgctaaaacaggaaggggcatgcctgaactttaa 624
Query: 481 gga 483
|||
Sbjct: 625 gga 627
>gnl|LJGI|TC64213 similar to UniRef100_A7PUD1 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 763
Score = 759 bits (383), Expect = 0.0
Identities = 458/483 (94%)
Strand = Plus / Plus
Query: 1 atgggttggaaagcagctgagaaactcattaggaactggaaaattgtcagaggggacaat 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 73 atgggttggaaagcagctgagaaactcattaggcactggaaaattgtcagaggtgacaat 132
Query: 61 gttatgattataagaggcaaagataagggtgagactggccttattaagcgtgtcattcgc 120
|||||||| |||||||||||||||||||| ||||| || ||||||||||||||||||||
Sbjct: 133 gttatgataataagaggcaaagataagggcgagaccggggttattaagcgtgtcattcgc 192
Query: 121 tcgcagaatcgtgtcattgttgagggtaaaaatctggtaaagaagcatatcaagcaaggg 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 tctcagaatcgtgtcattgttgagggtaaaaatctggtaaagaagcatatcaagcaaggg 252
Query: 181 caaggtcatgaagggggcatctttacagttgaagccccaattcatgcctccaatgtgcaa 240
||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 caaggtcatgagggtggtatctttacagttgaagccccaattcatgcctccaatgtgcaa 312
Query: 241 gttcgtgacccagtgacggggaatccttgcaagattgggattaaatatcttgaagatgga 300
||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gttcgggacccagttaccgggaatccttgcaagattgggattaaatatcttgaagatgga 372
Query: 301 actagagtcagagtatccagaggaataggagcatctggctctataatccctcgtccggag 360
||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 373 actagagtcagagtagccagaggaataggagcatctggttctataatccctcgtcctgag 432
Query: 361 atcttgaagatacgaactaccgcaagaccgtcagttcttggtcccagagatactccaatg 420
|||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 433 atcttgaagataagaactaccccaagaccttcagttcttggtcccagagatactccaatg 492
Query: 421 gatcttgtggtagagaagacatatgatgctaaaacaggaaggggcatgcctgaactttaa 480
||||| ||| ||||||||||||| ||||||||||||||||| ||||||||||| ||||||
Sbjct: 493 gatctagtgttagagaagacatacgatgctaaaacaggaagaggcatgcctgagctttaa 552
Query: 481 gga 483
|||
Sbjct: 553 gga 555
>gnl|LJGI|TC63605 similar to UniRef100_A7PUD1 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 861
Score = 751 bits (379), Expect = 0.0
Identities = 457/483 (94%)
Strand = Plus / Plus
Query: 1 atgggttggaaagcagctgagaaactcattaggaactggaaaattgtcagaggggacaat 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 59 atgggttggaaagcagctgagaaactcattaggcactggaaaattgtcagaggtgacaat 118
Query: 61 gttatgattataagaggcaaagataagggtgagactggccttattaagcgtgtcattcgc 120
|||||||| |||||||||||||||||||| ||||| || ||||||||||||||||||||
Sbjct: 119 gttatgataataagaggcaaagataagggcgagaccggggttattaagcgtgtcattcgc 178
Query: 121 tcgcagaatcgtgtcattgttgagggtaaaaatctggtaaagaagcatatcaagcaaggg 180
|| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 tctcagaatagtgtcattgttgagggtaaaaatctggtaaagaagcatatcaagcaaggg 238
Query: 181 caaggtcatgaagggggcatctttacagttgaagccccaattcatgcctccaatgtgcaa 240
||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 caaggtcatgagggtggtatctttacagttgaagccccaattcatgcctccaatgtgcaa 298
Query: 241 gttcgtgacccagtgacggggaatccttgcaagattgggattaaatatcttgaagatgga 300
||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 gttcgggacccagttaccgggaatccttgcaagattgggattaaatatcttgaagatgga 358
Query: 301 actagagtcagagtatccagaggaataggagcatctggctctataatccctcgtccggag 360
||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 359 actagagtcagagtagccagaggaataggagcatctggttctataatccctcgtcctgag 418
Query: 361 atcttgaagatacgaactaccgcaagaccgtcagttcttggtcccagagatactccaatg 420
|||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 419 atcttgaagataagaactaccccaagaccttcagttcttggtcccagagatactccaatg 478
Query: 421 gatcttgtggtagagaagacatatgatgctaaaacaggaaggggcatgcctgaactttaa 480
||||| ||| ||||||||||||| ||||||||||||||||| ||||||||||| ||||||
Sbjct: 479 gatctagtgttagagaagacatacgatgctaaaacaggaagaggcatgcctgagctttaa 538
Query: 481 gga 483
|||
Sbjct: 539 gga 541
>gnl|LJGI|BW600286 similar to UniRef100_A7PUD1 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (53%)
Length = 462
Score = 274 bits (138), Expect = 5e-73
Identities = 198/218 (90%)
Strand = Plus / Plus
Query: 208 gttgaagccccaattcatgcctccaatgtgcaagttcgtgacccagtgacggggaatcct 267
|||||| |||| ||| |||||| ||||||||||||| |||||| | || |||||||||
Sbjct: 239 gttgaatccccttttcctgcctctcatgtgcaagttcgggacccaattaccgggaatcct 298
Query: 268 tgcaagattgggattaaatatcttgaagatggaactagagtcagagtatccagaggaata 327
||| |||||||||||||| ||||||||||||||||| |||||||||| |||||||||||
Sbjct: 299 tgcccgattgggattaaatctcttgaagatggaactaaagtcagagtagccagaggaata 358
Query: 328 ggagcatctggctctataatccctcgtccggagatcttgaagatacgaactaccgcaaga 387
||||||||||| ||||||||||||||||| ||||||||||||||| |||||||| |||||
Sbjct: 359 ggagcatctggttctataatccctcgtcctgagatcttgaagataagaactaccccaaga 418
Query: 388 ccgtcagttcttggtcccagagatactccaatggatct 425
|| |||||||||||||||||||||||||||||||||||
Sbjct: 419 ccttcagttcttggtcccagagatactccaatggatct 456
>gnl|LJGI|FS325057 homologue to UniRef100_A7PUD1 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 684
Score = 131 bits (66), Expect = 4e-30
Identities = 87/94 (92%)
Strand = Plus / Plus
Query: 63 tatgattataagaggcaaagataagggtgagactggccttattaagcgtgtcattcgctc 122
||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||
Sbjct: 275 tatgattataagaggcaaagataagagcgagactggggttattaagcgtgtcattcgctc 334
Query: 123 gcagaatcgtgtcattgttgagggtaaaaatctg 156
||||||||| |||||||| ||||||||||||||
Sbjct: 335 tcagaatcgtttcattgttaagggtaaaaatctg 368
>gnl|LJGI|TC63866 homologue to UniRef100_A7PUD1 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 676
Score = 131 bits (66), Expect = 4e-30
Identities = 87/94 (92%)
Strand = Plus / Plus
Query: 63 tatgattataagaggcaaagataagggtgagactggccttattaagcgtgtcattcgctc 122
||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||
Sbjct: 319 tatgattataagaggcaaagataagagcgagactggggttattaagcgtgtcattcgctc 378
Query: 123 gcagaatcgtgtcattgttgagggtaaaaatctg 156
||||||||| |||||||| ||||||||||||||
Sbjct: 379 tcagaatcgtttcattgttaagggtaaaaatctg 412