Miyakogusa Predicted Gene

Lj1g3v3025180.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3025180.1 Non Chatacterized Hit- tr|J3LQP0|J3LQP0_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB03G3,32.12,1e-18,seg,NULL; Bromodomain transcription factors and
PHD do,Bromodomain transcription factor; Bromo_TP,Br,CUFF.29931.1
         (1148 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV774307 similar to UniRef100_A7PT71 Cluster: Chromosom...   468   e-131
gnl|LJGI|TC74259 similar to UniRef100_A7PT71 Cluster: Chromosome...   359   2e-98

>gnl|LJGI|AV774307 similar to UniRef100_A7PT71 Cluster: Chromosome chr8 scaffold_29,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr8 scaffold_29, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (9%)
          Length = 457

 Score =  468 bits (236), Expect = e-131
 Identities = 269/280 (96%)
 Strand = Plus / Minus

                                                                        
Query: 869  cctttgctcctgcgattgaggccatgaaaagcacatgctgtgattccaaggaagatcaaa 928
            |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||  |
Sbjct: 457  cctttgctcctgcgattgaggccatgcaaagcacatgctgtgattcccaggaagatccta 398

                                                                        
Query: 929  cacattttcctgtgaatgagaagcctactgtgcgttttaaggttgggattaaaaataaat 988
            ||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 397  caccttttcctgtgcatgagaagcctactgtgcgttttaaggttgggattgaaaataaat 338

                                                                        
Query: 989  tcttaggaaggtcggttggcttgattccacaaaaagaggagcataaaaagactttgccgt 1048
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 337  tcttaggaaggtcggttggcttgattccaccaaaagaggagcataaaaagactttgccgt 278

                                                                        
Query: 1049 ggtttgcgatggaagatgagaaggatgataggaaaagaagggctgagaaaattctgaggg 1108
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 277  ggtttgcgatggaagatgagaaggatgataggaaaagaagggctgagacaattctgaggg 218

                                                    
Query: 1109 aatctctggaaaacccagatcagcttgttcagttgtaaat 1148
            ||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 217  aatctctggtaaacccagatccgcttgttcagttgtaaat 178


>gnl|LJGI|TC74259 similar to UniRef100_A7PT71 Cluster: Chromosome chr8 scaffold_29,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_29, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (10%)
          Length = 602

 Score =  359 bits (181), Expect = 2e-98
 Identities = 184/185 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagcaatggcggtgggaagactggaagacaacttgaacagcctgctgccacatggagg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 atgagcaatggcggtgggaagactggaagacaacttgaacagcctgctgccacatggagg 477

                                                                       
Query: 61  aggaggacagtgggtggtggtgatgactttgctcaagcggttgcaaagattgcagtagca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 aggaggacagtgggtggtggtgatgactttgctcaagcggttgcaaagattgcagtagca 537

                                                                       
Query: 121 caaatatgcgaaagtgagggttttccggcctttcagcagtcagctcttgatgcattatct 180
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 538 caaatatgcgaaagtgagggttttctggcctttcagcagtcagctcttgatgcattatct 597

                
Query: 181 gacat 185
           |||||
Sbjct: 598 gacat 602