Miyakogusa Predicted Gene
- Lj1g3v3023740.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3023740.1 Non Chatacterized Hit- tr|K4B5B3|K4B5B3_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,59.21,1e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
coiled-coil,NULL; seg,NULL; DUF1675,Protein of unkn,CUFF.29903.1
(1215 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW616862 similar to UniRef100_A7PAA1 Cluster: Chromosom... 795 0.0
gnl|LJGI|TC74024 similar to UniRef100_Q0DU04 Cluster: Os03g02142... 198 6e-50
>gnl|LJGI|BW616862 similar to UniRef100_A7PAA1 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 477
Score = 795 bits (401), Expect = 0.0
Identities = 404/405 (99%)
Strand = Plus / Plus
Query: 54 aacagcagcccaaatgagtggtttcccgagagatctgttgaagagtttcatggcggcgac 113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aacagcagcccaaatgagtggtttcccgagagatctgttgaagagtttcatggcggcgac 60
Query: 114 gaacaatcacctccagaagcagaaaatgaatttgccggggatgaaggtggaggcggagca 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaacaatcacctccagaagcagaaaatgaatttgccggggatgaaggtggaggcggagca 120
Query: 174 acgtgatgcaggggagaaggaaggagcagaggaggaggagttagagctgagtcttggcct 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acgtgatgcaggggagaaggaaggagcagaggaggaggagttagagctgagtcttggcct 180
Query: 234 ttcgatgaatggtcgatttggggtggacccgaatgcggccaagaagatcaagagaacgac 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttcgatgaatggtcgatttggggtggacccgaatgcggccaagaagatcaagagaacgac 240
Query: 294 gtcgaaaccggagtttgtgaaccaggcgaggaatgaggagatggggtatgcggtggcgcc 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtcgaaaccggagtttgtgaaccaggcgaggaatgaggagatggggtatgcggtggcgcc 300
Query: 354 ggtggcggcttatggcggcggtggtagcagtggaagcggatatgtcggcggtggtgctgg 413
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggtgtcggcttatggcggcggtggtagcagtggaagcggatatgtcggcggtggtgctgg 360
Query: 414 tggtggtggtcatctgatcaggacgtgttcccttccgacggagac 458
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tggtggtggtcatctgatcaggacgtgttcccttccgacggagac 405
>gnl|LJGI|TC74024 similar to UniRef100_Q0DU04 Cluster: Os03g0214200 protein; n=1; Oryza
sativa Japonica Group|Rep: Os03g0214200 protein - Oryza
sativa subsp. japonica (Rice), partial (31%)
Length = 462
Score = 198 bits (100), Expect = 6e-50
Identities = 100/100 (100%)
Strand = Plus / Plus
Query: 1116 tggccttttcatgaccccagccgagtttgttaaacatgccggtggcgaggatgtagccaa 1175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40 tggccttttcatgaccccagccgagtttgttaaacatgccggtggcgaggatgtagccaa 99
Query: 1176 ccccttgaagcacattgttgttagtccaagctttttgtaa 1215
||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 ccccttgaagcacattgttgttagtccaagctttttgtaa 139