Miyakogusa Predicted Gene
- Lj1g3v3022480.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3022480.1 Non Chatacterized Hit- tr|A1CCH2|A1CCH2_ASPCL DNA
repair protein Nse1, putative OS=Aspergillus
clava,25.3,4e-18,SMC_Nse1,Nse1 non-SMC component of SMC5-6 complex;
zf-RING-like,Zinc finger, RING-like; SUBFAMILY NO,CUFF.29993.1
(1035 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62786 similar to UniRef100_A7PG47 Cluster: Chromosome... 1814 0.0
gnl|LJGI|TC76410 similar to UniRef100_A7PG47 Cluster: Chromosome... 559 e-158
gnl|LJGI|BW613952 similar to UniRef100_A7PG47 Cluster: Chromosom... 305 3e-82
gnl|LJGI|BW617461 119 4e-26
>gnl|LJGI|TC62786 similar to UniRef100_A7PG47 Cluster: Chromosome chr6 scaffold_15,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_15, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (61%)
Length = 1502
Score = 1814 bits (915), Expect = 0.0
Identities = 918/919 (99%)
Strand = Plus / Plus
Query: 117 aggcgctgaccgtaagctatttgatgcgtttattctgaccataaacaaagcactcacttg 176
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 267 aggcgctgaccgtaagctatttgatacgtttattctgaccataaacaaagcactcacttg 326
Query: 177 tgctaattttgagttgcgtggctgcatagatcaatatgatgggcaagtttattatggagt 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tgctaattttgagttgcgtggctgcatagatcaatatgatgggcaagtttattatggagt 386
Query: 237 ggtcaatactgtttctgatgaacaatcgaagttgggaacgaagtatactgttccgcagat 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ggtcaatactgtttctgatgaacaatcgaagttgggaacgaagtatactgttccgcagat 446
Query: 297 tgctttctataaggctgttattgaagcgatcgttcaagatgccactgcaaatggttatat 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tgctttctataaggctgttattgaagcgatcgttcaagatgccactgcaaatggttatat 506
Query: 357 ctccagcattggtgctctcaatcttaatttggatagtcaggttacagttgcgaccgatcc 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ctccagcattggtgctctcaatcttaatttggatagtcaggttacagttgcgaccgatcc 566
Query: 417 acaatctcaaggaagccaagcacttgtccctcctgcattgaagaattttggcttgtctca 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 acaatctcaaggaagccaagcacttgtccctcctgcattgaagaattttggcttgtctca 626
Query: 477 aaaggaaaaagctctagatgaacttgtgagagaccggtggcttcatttgactacagatgg 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 aaaggaaaaagctctagatgaacttgtgagagaccggtggcttcatttgactacagatgg 686
Query: 537 taatattaaacttggtgtgaagtcattccttgatcttcgcagttggtttctaaataatga 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 taatattaaacttggtgtgaagtcattccttgatcttcgcagttggtttctaaataatga 746
Query: 597 ggttccatcctgtcatgtttgcaatgaagctggaataaaggcagagttatgccaaaatga 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 ggttccatcctgtcatgtttgcaatgaagctggaataaaggcagagttatgccaaaatga 806
Query: 657 aagctgtactgttcgaattcaccactactgcctgaagcaacttttctcacagagaaaggc 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 aagctgtactgttcgaattcaccactactgcctgaagcaacttttctcacagagaaaggc 866
Query: 717 tgcaaaagtttgcccaagttgtagcacttcatggccctatgtagtacccaaggctgaagc 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 tgcaaaagtttgcccaagttgtagcacttcatggccctatgtagtacccaaggctgaagc 926
Query: 777 actacatattgaagaagacaatgaacctcctcaggaaagccaacgagctactagttctaa 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927 actacatattgaagaagacaatgaacctcctcaggaaagccaacgagctactagttctaa 986
Query: 837 aagaaagaagcgcagagccaatatagtcattgaggatgaagatgttggatccagcaatca 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987 aagaaagaagcgcagagccaatatagtcattgaggatgaagatgttggatccagcaatca 1046
Query: 897 ggatgagctgaatggattgacaagaaaagcgagtagagcacgtagagctaacgttgcaga 956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1047 ggatgagctgaatggattgacaagaaaagcgagtagagcacgtagagctaacgttgcaga 1106
Query: 957 tacaggaggacctagtgcatctcaatcttctgcaacttctgctttcagaagagttactcg 1016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1107 tacaggaggacctagtgcatctcaatcttctgcaacttctgctttcagaagagttactcg 1166
Query: 1017 aagatctagtcaaatgtaa 1035
|||||||||||||||||||
Sbjct: 1167 aagatctagtcaaatgtaa 1185
>gnl|LJGI|TC76410 similar to UniRef100_A7PG47 Cluster: Chromosome chr6 scaffold_15,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_15, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 460
Score = 559 bits (282), Expect = e-158
Identities = 285/286 (99%)
Strand = Plus / Plus
Query: 1 atgtcgggtgggttaaactcgaggcaccatgttgtaattcaagctctattgtcacgaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 atgtcgggtgggttaaactcgaggcaccatgttgtaattcaagctctattgtcacgaggc 234
Query: 61 ccgctcaaggagaaggaattacactccatgtttgaggacatcaccaagagaaacccaggc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 ccgctcaaggagaaggaattacactccatgtttgaggacatcaccaagagaaacccagga 294
Query: 121 gctgaccgtaagctatttgatgcgtttattctgaccataaacaaagcactcacttgtgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gctgaccgtaagctatttgatgcgtttattctgaccataaacaaagcactcacttgtgct 354
Query: 181 aattttgagttgcgtggctgcatagatcaatatgatgggcaagtttattatggagtggtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 aattttgagttgcgtggctgcatagatcaatatgatgggcaagtttattatggagtggtc 414
Query: 241 aatactgtttctgatgaacaatcgaagttgggaacgaagtatactg 286
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 aatactgtttctgatgaacaatcgaagttgggaacgaagtatactg 460
>gnl|LJGI|BW613952 similar to UniRef100_A7PG47 Cluster: Chromosome chr6 scaffold_15,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_15, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 474
Score = 305 bits (154), Expect = 3e-82
Identities = 154/154 (100%)
Strand = Plus / Plus
Query: 206 atcaatatgatgggcaagtttattatggagtggtcaatactgtttctgatgaacaatcga 265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atcaatatgatgggcaagtttattatggagtggtcaatactgtttctgatgaacaatcga 380
Query: 266 agttgggaacgaagtatactgttccgcagattgctttctataaggctgttattgaagcga 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agttgggaacgaagtatactgttccgcagattgctttctataaggctgttattgaagcga 440
Query: 326 tcgttcaagatgccactgcaaatggttatatctc 359
||||||||||||||||||||||||||||||||||
Sbjct: 441 tcgttcaagatgccactgcaaatggttatatctc 474
Score = 252 bits (127), Expect = 4e-66
Identities = 127/127 (100%)
Strand = Plus / Plus
Query: 1 atgtcgggtgggttaaactcgaggcaccatgttgtaattcaagctctattgtcacgaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 atgtcgggtgggttaaactcgaggcaccatgttgtaattcaagctctattgtcacgaggc 253
Query: 61 ccgctcaaggagaaggaattacactccatgtttgaggacatcaccaagagaaacccaggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ccgctcaaggagaaggaattacactccatgtttgaggacatcaccaagagaaacccaggc 313
Query: 121 gctgacc 127
|||||||
Sbjct: 314 gctgacc 320
>gnl|LJGI|BW617461
Length = 455
Score = 119 bits (60), Expect = 4e-26
Identities = 60/60 (100%)
Strand = Plus / Plus
Query: 1 atgtcgggtgggttaaactcgaggcaccatgttgtaattcaagctctattgtcacgaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 atgtcgggtgggttaaactcgaggcaccatgttgtaattcaagctctattgtcacgaggc 455