Miyakogusa Predicted Gene

Lj1g3v3022270.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3022270.1 Non Chatacterized Hit- tr|K3XYP6|K3XYP6_SETIT
Uncharacterized protein OS=Setaria italica GN=Si007054,70.77,4e-19,
,CUFF.29886.1
         (198 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81468 similar to UniRef100_A7Q9C7 Cluster: Chromosome...   343   2e-94
gnl|LJGI|DC599429 similar to UniRef100_A7Q9C7 Cluster: Chromosom...   240   3e-63

>gnl|LJGI|TC81468 similar to UniRef100_A7Q9C7 Cluster: Chromosome chr19 scaffold_66,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr19 scaffold_66, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (75%)
          Length = 912

 Score =  343 bits (173), Expect = 2e-94
 Identities = 179/181 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggggtggttggattccctgtttggggaaggacgaaaagttattaaaaggaaggacagt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10  atggggtggttggattccctgtttggggaaggacgaaaagttattaaaaggaaggacagt 69

                                                                       
Query: 61  gatgctggagaagcaggtagagcactggaggagataagaggttctttgcacaatgagctc 120
           ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 70  gatgctggagaagcaggtagagcactggaggagatgagaggttctttgtacaatgagctc 129

                                                                       
Query: 121 cggacctcagaaggagccaagcgccaacaacaaagatactgtggaccaacggtggcattg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 cggacctcagaaggagccaagcgccaacaacaaagatactgtggaccaacggtggcattg 189

            
Query: 181 a 181
           |
Sbjct: 190 a 190


>gnl|LJGI|DC599429 similar to UniRef100_A7Q9C7 Cluster: Chromosome chr19 scaffold_66,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr19 scaffold_66, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (7%)
          Length = 466

 Score =  240 bits (121), Expect = 3e-63
 Identities = 126/128 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggggtggttggattccctgtttggggaaggacgaaaagttattaaaaggaaggacagt 60
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 339 atggggtggttggattccctgtttggggaaggacgaaaagttattanaaggaaggacagt 398

                                                                       
Query: 61  gatgctggagaagcaggtagagcactggaggagataagaggttctttgcacaatgagctc 120
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 399 gatgctggagaagcaggtagagcactggaggagataagaggttctttgtacaatgagctc 458

                   
Query: 121 cggacctc 128
           ||||||||
Sbjct: 459 cggacctc 466